Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30864
         (826 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.9  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 462 VRYTVFPWWQSRIPQFFPLYRLNY 391
           V Y  F W Q    +FF LY + Y
Sbjct: 411 VTYETFVWTQIMGAEFFKLYAVEY 434


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 749 IPWVSKDSNGI*FSKSGYTVP 811
           +P++S+ S     +K+GYT+P
Sbjct: 362 VPFISRVSGSEIQTKTGYTIP 382


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 749 IPWVSKDSNGI*FSKSGYTVP 811
           +P++S+ S     +K+GYT+P
Sbjct: 362 VPFISRVSGSEIQTKTGYTIP 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,887
Number of Sequences: 336
Number of extensions: 4192
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)