Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30864
         (826 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   6.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   7.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   7.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   7.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   7.9  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    22   7.9  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
 Frame = +2

Query: 494 CAKTVKVEAAKGFEAGIQCF*KTFCCEELK-------QKCFSIRDGCV 616
           C+   +V  AK + AG QC    F C + +        +C S R G V
Sbjct: 587 CSLPCEVGQAKKYVAGEQCCWHCFNCTQYQIRDHKDVTQCISCRQGTV 634


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 120 CPALCPSEVLIVFL 79
           CP  CPS+ ++ F+
Sbjct: 353 CPDCCPSDRMVYFI 366


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 120 CPALCPSEVLIVFL 79
           CP  CPS+ ++ F+
Sbjct: 353 CPDCCPSDRMVYFI 366


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 145 VACCCNCAKNYG 180
           ++CCC C  N G
Sbjct: 9   MSCCCWCCDNLG 20


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 120 CPALCPSEVLIVFL 79
           CP  CPS+ ++ F+
Sbjct: 353 CPDCCPSDRMVYFI 366


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 719 SRGLILFLLKIPWVSKDSNGI*FSKSGY 802
           +RG +LF    P  ++DS+G+    SGY
Sbjct: 45  NRGPVLFPPGPPPNNEDSSGVIVGASGY 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,416
Number of Sequences: 438
Number of extensions: 4319
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)