Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30862
         (895 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding pr...    26   1.8  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           25   4.1  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   4.1  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    25   4.1  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   7.2  

>AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding
           protein OBPjj7a protein.
          Length = 235

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 572 NFKRIHHLYKPCGLRVLKKEKKEGLVIP 655
           N ++IH + K C + V  K K +G   P
Sbjct: 71  NMEKIHEIKKQCFMEVRNKNKADGAYEP 98


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 308 DPDPEQLTDIEDASFLLQQKLPEPINHERACTKC 409
           DPD  ++TD E A+  ++ +L EP++ +  C KC
Sbjct: 160 DPDGVRMTDHESAT--MEIRLKEPVDCK--CFKC 189


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -1

Query: 775 LLRTPLLEALSPLI*SNHLNVEIREDVFHPIAPTV 671
           LL T +L  LS ++    LNV  R  V H +AP V
Sbjct: 306 LLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWV 340


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 390 REHALNVRIYPFVLCICGIREAHQSLKIIRC 482
           +E  LN        C+C +REA   +K  +C
Sbjct: 303 KERVLNPGKLKVGWCVCSLREATVQVKCFKC 333


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 775 LLRTPLLEALSPLI*SNHLNVEIREDVFHPIAPTVFNFQI 656
           LL T +L  LS +I    LN+  R+   H +AP V  F I
Sbjct: 319 LLFTMILVGLSVVITIIILNIHYRKPSTHKMAPWVRKFFI 358


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 977,656
Number of Sequences: 2352
Number of extensions: 22153
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)