Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30861
(810 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 161 5e-40
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 158 6e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 4e-38
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 118 7e-27
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 78 1e-14
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 67 1e-11
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 65 6e-11
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14) 33 0.36
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 32 0.63
SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.5
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.6
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 30 2.6
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 3.4
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 3.4
SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36) 29 4.5
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 29 5.9
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 29 5.9
SB_52369| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.18) 28 7.8
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 7.8
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 161 bits (392), Expect = 5e-40
Identities = 73/90 (81%), Positives = 85/90 (94%)
Frame = +2
Query: 2 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 181
RNVLI+DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD
Sbjct: 193 RNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKD 252
Query: 182 LATNKRALMRLRTACERAKRTLSSSHKRAL 271
+ NKRA+ RLRTACERAKRTLSSS + ++
Sbjct: 253 ITPNKRAMRRLRTACERAKRTLSSSTQASI 282
Score = 140 bits (338), Expect = 2e-33
Identities = 69/93 (74%), Positives = 78/93 (83%), Gaps = 2/93 (2%)
Frame = +1
Query: 235 KEDLVIVTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM--DK 408
K L TQASIEIDSLFEGIDFYTSITRARFEELN DLF+ T EPVE+++RD+K+ K
Sbjct: 271 KRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGGK 330
Query: 409 AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK 507
IHDIVLVGGSTRIPK+QK+LQ+ F GKELNK
Sbjct: 331 ESIHDIVLVGGSTRIPKIQKMLQELFGGKELNK 363
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +3
Query: 492 KGAQQIINPDEXXXXXXXXXXXILHGDKSEEVQDLLLLDVTPL 620
K + INPDE ILHGDK + V+DLLLLDV PL
Sbjct: 359 KELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLDVAPL 401
Score = 31.9 bits (69), Expect = 0.63
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +2
Query: 617 PFPSGIENSGGVMNHTSSSVNTTIPN*NRLQTFHQPNS**PNPGYSIQVFKG 772
P GIE +GGVM+ N+TIP + QTF + PG IQVF+G
Sbjct: 400 PLSMGIETAGGVMS-VLIKRNSTIPT-KQTQTFTTYSD--NQPGVLIQVFEG 447
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 158 bits (383), Expect = 6e-39
Identities = 74/91 (81%), Positives = 84/91 (92%), Gaps = 1/91 (1%)
Frame = +2
Query: 2 RNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKK 178
+NVLIFDLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKK
Sbjct: 193 KNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKK 252
Query: 179 DLATNKRALMRLRTACERAKRTLSSSHKRAL 271
D++ N RA+ RLRTACERAKRTLSSS + ++
Sbjct: 253 DMSKNSRAMRRLRTACERAKRTLSSSTEASI 283
Score = 130 bits (313), Expect = 2e-30
Identities = 58/91 (63%), Positives = 76/91 (83%)
Frame = +1
Query: 235 KEDLVIVTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 414
K L T+ASIE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV K+L DAK K+
Sbjct: 272 KRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKSD 331
Query: 415 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNK 507
IH++VLVGGSTR+PK+QK+L+++F+GK LNK
Sbjct: 332 IHEVVLVGGSTRVPKIQKMLEEYFSGKSLNK 362
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +3
Query: 492 KGAQQIINPDEXXXXXXXXXXXILHGDKSEEVQDLLLLDVTPLFPRVLRILEVS*TTLHQ 671
K + INPDE IL GDKS+EV+D+LL+DV PL + EV + +
Sbjct: 358 KSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVDVAPLSLGIETAGEVMTKLIER 417
Query: 672 ALTLPSPIKTDFRHFTN 722
+P+ F +++
Sbjct: 418 NARIPTKATQTFTTYSD 434
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 155 bits (376), Expect = 4e-38
Identities = 72/90 (80%), Positives = 82/90 (91%)
Frame = +2
Query: 2 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 181
RNVLIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++FK+KYKKD
Sbjct: 286 RNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKD 345
Query: 182 LATNKRALMRLRTACERAKRTLSSSHKRAL 271
+ NKRAL RLRTACERAKRTLSSS + ++
Sbjct: 346 ITPNKRALRRLRTACERAKRTLSSSTQASI 375
Score = 137 bits (332), Expect = 9e-33
Identities = 65/92 (70%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
Frame = +1
Query: 235 KEDLVIVTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD-KA 411
K L TQASIEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPVEK+++D+K++ K
Sbjct: 364 KRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESKE 423
Query: 412 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK 507
+I +IV+VGGSTRIPK+Q LLQ+FFNGKELNK
Sbjct: 424 KIDEIVMVGGSTRIPKIQSLLQNFFNGKELNK 455
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/84 (38%), Positives = 40/84 (47%)
Frame = +3
Query: 492 KGAQQIINPDEXXXXXXXXXXXILHGDKSEEVQDLLLLDVTPLFPRVLRILEVS*TTLHQ 671
K + INPDE ILHGDKSE QDLLLLDV PL + V + +
Sbjct: 451 KELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLLLLDVAPLTLGLETAGGVMTAAIKR 510
Query: 672 ALTLPSPIKTDFRHFTNLTLDNQT 743
T+P+ F ++ DNQT
Sbjct: 511 NTTIPTKQTQTFTTYS----DNQT 530
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 118 bits (283), Expect = 7e-27
Identities = 56/90 (62%), Positives = 71/90 (78%)
Frame = +1
Query: 229 EGKEDLVIVTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 408
+ K L QA +EI+S FEG DF +TRARFEELNA LF+ST++PV+K L DA + K
Sbjct: 966 KAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKK 1025
Query: 409 AQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 498
++IH+IVLVGGSTRIPKVQ+L++DFF GKE
Sbjct: 1026 SEIHEIVLVGGSTRIPKVQQLVKDFFEGKE 1055
Score = 115 bits (277), Expect = 4e-26
Identities = 48/87 (55%), Positives = 70/87 (80%)
Frame = +2
Query: 2 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 181
+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD ++ HF++ +K+K K+
Sbjct: 890 KNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKN 949
Query: 182 LATNKRALMRLRTACERAKRTLSSSHK 262
+ + RA+ +LR E+AKR LS+ H+
Sbjct: 950 IRKDNRAVQKLRREVEKAKRALSTQHQ 976
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 103 bits (248), Expect = 1e-22
Identities = 47/83 (56%), Positives = 63/83 (75%)
Frame = +2
Query: 8 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 187
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61
Query: 188 TNKRALMRLRTACERAKRTLSSS 256
+ AL RLR A E+AK LSSS
Sbjct: 62 KDSMALQRLREAAEKAKIELSSS 84
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/58 (50%), Positives = 45/58 (77%)
Frame = +1
Query: 313 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 486
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F
Sbjct: 108 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF 165
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 510 INPDEXXXXXXXXXXXILHGDKSEEVQDLLLLDVTPL 620
+NPDE +L GD V+D+LLLDVTPL
Sbjct: 173 VNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPL 205
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 77.8 bits (183), Expect = 1e-14
Identities = 33/80 (41%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
Frame = +1
Query: 274 IDSLFEG---IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGS 444
+ SL EG + F +I+R FE +N DLF+ ++P+ + L + ++ K ++ ++VLVGGS
Sbjct: 314 LPSLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRVLAEVELPKEEVDEVVLVGGS 373
Query: 445 TRIPKVQKLLQDFFNGKELN 504
TR+PK+++L+Q+FF+GK N
Sbjct: 374 TRVPKIRQLIQEFFDGKPPN 393
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/93 (36%), Positives = 58/93 (62%)
Frame = +2
Query: 5 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 184
NV++ DLGGGT DVS+L I+ G+F + AG+ LGG+DF+ R + + +Q +++ + L
Sbjct: 223 NVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQL 282
Query: 185 ATNKRALMRLRTACERAKRTLSSSHKRALR*IL 283
T + RLR E AK L+ +++ ++ +L
Sbjct: 283 -TCSEDIQRLRQEVEAAKINLTRTNEVTIKLML 314
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = +2
Query: 2 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 181
RNV+ D+G + V I G +V STA + +LGG DFD +V HF QEFK KYK D
Sbjct: 253 RNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKID 312
Query: 182 LATNKRALMRLRTACERAKRTLSSS 256
+ ++ +A ++L CE+ K+ +S++
Sbjct: 313 VHSSIKAKIKLGAECEKLKKLMSAN 337
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +1
Query: 256 TQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIV 429
++ I I+ E D + + RA+FEEL ADL + P+ +L A+ K + ++V
Sbjct: 339 SEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQSGKYSVKNVV 394
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/58 (50%), Positives = 45/58 (77%)
Frame = +1
Query: 313 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 486
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF 110
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 510 INPDEXXXXXXXXXXXILHGDKSEEVQDLLLLDVTPL 620
+NPDE +L GD V+D+LLLDVTPL
Sbjct: 118 VNPDEAVAIGAAIQGGVLAGD----VKDVLLLDVTPL 150
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 65.3 bits (152), Expect = 6e-11
Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 5/87 (5%)
Frame = +2
Query: 8 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR-----KY 172
VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR K+
Sbjct: 156 VLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLLWKW 215
Query: 173 KKDLATNKRALMRLRTACERAKRTLSS 253
K D TNKR+ +L+T+ E+ K LS+
Sbjct: 216 KIDPLTNKRSKTKLQTSAEQCKNILST 242
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/79 (40%), Positives = 43/79 (54%)
Frame = +1
Query: 271 EIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTR 450
+I+ +F+G DF +TR EE+ DLF PV ++L+ A M I +VLVGG R
Sbjct: 267 QIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDIDSVVLVGGGIR 326
Query: 451 IPKVQKLLQDFFNGKELNK 507
+PKVQ L EL K
Sbjct: 327 VPKVQDALLRAVKKPELAK 345
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 80 VKSTAGDTHLGGEDFDNRMVNHFVQEFKR--KYKKDLATNKRALMRLRTACERAKRTLSS 253
+K D LGG D R+ +H VQ FK+ K+K ++ + RA+ + R K+ LS+
Sbjct: 201 IKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSA 260
Query: 254 SHK 262
+++
Sbjct: 261 NNE 263
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/34 (44%), Positives = 28/34 (82%)
Frame = +1
Query: 400 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKEL 501
+ ++ + ++LVGG+TR PK+Q+LL+++F GKE+
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEI 68
>SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14)
Length = 1085
Score = 32.7 bits (71), Expect = 0.36
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Frame = +2
Query: 32 GTFDV-SILTIEDGIFEVKSTAGDTHLG----GEDFDNRMVNHFVQEFKRKYKKD-LATN 193
GTFD+ I+ + + I E + + +L G + +V F ++R K L T
Sbjct: 50 GTFDIIRIVCLRESIREFRFSHFRENLSLPLYGLPANKTVVRFFKTAYERVLKFCFLKTA 109
Query: 194 KRALMR-LRTACERAKRTLSSSHKRALR 274
+MR L+TACER R L +++KR +R
Sbjct: 110 YEKVMRFLKTACERVMRFLKTAYKREMR 137
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +1
Query: 412 QIHDIVLVGGSTRIPKVQKLLQDFFNGKEL 501
+I + +VGGSTRIP ++ ++++ F GKEL
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKEL 34
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 31.9 bits (69), Expect = 0.63
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 145 LCPGVQEEIQKGPRYQQESSYAFAYCM*EGKEDL 246
LCP ++ + GP +++E YAFA C+ D+
Sbjct: 202 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDM 235
>SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 31.9 bits (69), Expect = 0.63
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 145 LCPGVQEEIQKGPRYQQESSYAFAYCM*EGKEDL 246
LCP ++ + GP +++E YAFA C+ D+
Sbjct: 140 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDM 173
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.5 bits (68), Expect = 0.84
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 145 LCPGVQEEIQKGPRYQQESSYAFAYCM*EGK 237
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 5 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 124
+ LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 20 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 124
D G GT VS + +E+G +++ D H+ G F
Sbjct: 1526 DNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 8 VLIFDLGGGTFDVSILTIEDGIFEVK 85
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 136 GQPLCPGVQEEIQKGPRYQQESSYAFAYCM 225
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 14 IFDLGGGTFDVSILTIEDGIFEV 82
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 145 LCPGVQEEIQKGPRYQQESSYAFAYCM*EGK 237
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 18 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 161
L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 87 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 203
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36)
Length = 885
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 138 STTLSRSSRGNTKRTSLPTRELLCVCVLHVRGQRGPCHRHTSE 266
S LS S G K +LPT++ L H RG C HT +
Sbjct: 80 SVLLSGSCDGEVKLWNLPTKDCLRTITAHKGFVRGLCVDHTGQ 122
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 21 TSAAVPSTCPSLPSRMVSSR*NPPPATP 104
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 145 LCPGVQEEIQKGPRYQQESSYAFAYCM 225
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 145 LCPGVQEEIQKGPRYQQESSYAFAYCM 225
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_52369| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.18)
Length = 308
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = -2
Query: 617 GCYIKQQQILHLLRLVTVQDSSLXSCTISYGL------VRVNNLLSSFPLKKSC 474
GC + +H+ V S SCT+S+G +R + + S PL + C
Sbjct: 171 GCIVSHIDPMHIFDRPIVSCSFFSSCTLSFGCKFSFKPIRTTDPILSLPLPRGC 224
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 274 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 393
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,218,211
Number of Sequences: 59808
Number of extensions: 593774
Number of successful extensions: 4209
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4202
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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