Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30859
(788 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 24 1.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 24 1.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 24 1.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 24 1.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 24 1.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 24 1.2
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 24 1.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 24 1.2
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 23 2.1
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.1
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 22 6.4
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 22 6.4
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 8.5
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.2
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = -1
Query: 218 LSGTRVRRGRPSTQPAACDTCGQTTMSVSLAGSDGVVLPSAPPIA---LSARSLS----S 60
L+ T ++ T P+A +T S +A + APP + LS S S S
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 59 TNITCCVSVTVSP 21
+ +T +SV+ SP
Sbjct: 141 SGLTSPLSVSTSP 153
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.2
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = -1
Query: 218 LSGTRVRRGRPSTQPAACDTCGQTTMSVSLAGSDGVVLPSAPPIA---LSARSLS----S 60
L+ T ++ T P+A +T S +A + APP + LS S S S
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 59 TNITCCVSVTVSP 21
+ +T +SV+ SP
Sbjct: 141 SGLTSPLSVSTSP 153
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.2 bits (50), Expect = 1.2
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = -1
Query: 218 LSGTRVRRGRPSTQPAACDTCGQTTMSVSLAGSDGVVLPSAPPIA---LSARSLS----S 60
L+ T ++ T P+A +T S +A + APP + LS S S S
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 59 TNITCCVSVTVSP 21
+ +T +SV+ SP
Sbjct: 141 SGLTSPLSVSTSP 153
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.2
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = -1
Query: 218 LSGTRVRRGRPSTQPAACDTCGQTTMSVSLAGSDGVVLPSAPPIA---LSARSLS----S 60
L+ T ++ T P+A +T S +A + APP + LS S S S
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 59 TNITCCVSVTVSP 21
+ +T +SV+ SP
Sbjct: 141 SGLTSPLSVSTSP 153
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.2 bits (50), Expect = 1.2
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = -1
Query: 218 LSGTRVRRGRPSTQPAACDTCGQTTMSVSLAGSDGVVLPSAPPIA---LSARSLS----S 60
L+ T ++ T P+A +T S +A + APP + LS S S S
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 59 TNITCCVSVTVSP 21
+ +T +SV+ SP
Sbjct: 141 SGLTSPLSVSTSP 153
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 24.2 bits (50), Expect = 1.2
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = -1
Query: 218 LSGTRVRRGRPSTQPAACDTCGQTTMSVSLAGSDGVVLPSAPPIA---LSARSLS----S 60
L+ T ++ T P+A +T S +A + APP + LS S S S
Sbjct: 37 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 96
Query: 59 TNITCCVSVTVSP 21
+ +T +SV+ SP
Sbjct: 97 SGLTSPLSVSTSP 109
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 24.2 bits (50), Expect = 1.2
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = -1
Query: 218 LSGTRVRRGRPSTQPAACDTCGQTTMSVSLAGSDGVVLPSAPPIA---LSARSLS----S 60
L+ T ++ T P+A +T S +A + APP + LS S S S
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 59 TNITCCVSVTVSP 21
+ +T +SV+ SP
Sbjct: 141 SGLTSPLSVSTSP 153
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.2
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = -1
Query: 218 LSGTRVRRGRPSTQPAACDTCGQTTMSVSLAGSDGVVLPSAPPIA---LSARSLS----S 60
L+ T ++ T P+A +T S +A + APP + LS S S S
Sbjct: 81 LASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 59 TNITCCVSVTVSP 21
+ +T +SV+ SP
Sbjct: 141 SGLTSPLSVSTSP 153
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +1
Query: 385 TPRSNSPTSPH--SQSPRTRPPRAGQTNRSILCSARRSNAT 501
TP NSPT P+ ++ + P + + +I S++R +
Sbjct: 436 TPTENSPTKPYYKLKTANNKRPPSTELGTNIYTSSKRQRTS 476
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.4 bits (48), Expect = 2.1
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = -1
Query: 218 LSGTRVRRGRPSTQPAACDTCGQTTMSVSLAGSDGVVLPSAPPIA---LSARSLS----S 60
L+ T ++ T P+A +T S +A + APP + LS S S S
Sbjct: 81 LAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKS 140
Query: 59 TNITCCVSVTVSP 21
+ +T +SV+ SP
Sbjct: 141 SGLTSPLSVSTSP 153
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 610 CQHCQPRTCPSQKLRHHRRV 551
C+HC + LR H RV
Sbjct: 40 CEHCDRQFVQVANLRRHLRV 59
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 610 CQHCQPRTCPSQKLRHHRRV 551
C+HC + LR H RV
Sbjct: 193 CEHCDRQFVQVANLRRHLRV 212
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -2
Query: 646 TSPGTWWS 623
T P TWWS
Sbjct: 1037 TKPSTWWS 1044
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,676
Number of Sequences: 336
Number of extensions: 3408
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -