BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30859 (788 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 101 9e-23 SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 77 4e-15 SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces p... 52 9e-08 SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.43 SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 29 0.76 SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces po... 28 1.8 SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 1.8 SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 27 2.3 SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 27 3.1 SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 26 5.4 SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 26 5.4 SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3 |Schizos... 25 9.4 SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyce... 25 9.4 SPBC16G5.07c |||prohibitin |Schizosaccharomyces pombe|chr 2|||Ma... 25 9.4 >SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 1310 Score = 101 bits (243), Expect = 9e-23 Identities = 45/78 (57%), Positives = 61/78 (78%) Frame = +3 Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSYAT 440 IGK+++K+ +PV+F+EP S+LQR+ ED EY+ +LDQA+ DP Q++ YVAAF S YA+ Sbjct: 946 IGKDMTKMTLPVSFNEPTSLLQRVAEDMEYTELLDQASHNKDPYQRILYVAAFAASEYAS 1005 Query: 441 TACRTNKPFNPLLGETFE 494 T R KPFNPLLGET+E Sbjct: 1006 TLNRVAKPFNPLLGETYE 1023 >SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 945 Score = 76.6 bits (180), Expect = 4e-15 Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 3/84 (3%) Frame = +3 Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSYAT 440 IGK++S IP PV +EP ++LQR ED EYS++LD+A + DD ++ YVAAF VS+++ Sbjct: 581 IGKDISSIPAPVVSNEPCNLLQRCAEDLEYSNMLDKANECDDDI-KIFYVAAFAVSNFSN 639 Query: 441 TACR---TNKPFNPLLGETFECDR 503 + K F+PLLGETFE R Sbjct: 640 MRHKERSVRKVFSPLLGETFELVR 663 Score = 25.4 bits (53), Expect = 9.4 Identities = 10/37 (27%), Positives = 21/37 (56%) Frame = +3 Query: 630 QVPGEVTPDPTARSRLPPSSSGNGKQVTTLKKVTNNV 740 Q+PG+ + R+ + +++ N + TL+KVT + Sbjct: 302 QLPGDAKENKETRTSVEITAAENAQAAVTLRKVTRQL 338 >SPCC23B6.01c |||oxysterol binding protein |Schizosaccharomyces pombe|chr 3|||Manual Length = 489 Score = 52.0 bits (119), Expect = 9e-08 Identities = 27/74 (36%), Positives = 37/74 (50%) Frame = +3 Query: 270 ELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSYATTAC 449 +LSK+ P EP SML+R+T + +L K DP + V F +S + Sbjct: 43 DLSKVTFPTFVLEPKSMLERITNFMSHPDLLLNVQKTADPEMRFLDVVRFYMSGWHIRPR 102 Query: 450 RTNKPFNPLLGETF 491 KP NP+LGETF Sbjct: 103 GVKKPLNPILGETF 116 >SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 317 Score = 29.9 bits (64), Expect = 0.43 Identities = 20/54 (37%), Positives = 27/54 (50%) Frame = -1 Query: 170 ACDTCGQTTMSVSLAGSDGVVLPSAPPIALSARSLSSTNITCCVSVTVSPSDSS 9 AC TC +T S+S +G+ + S P + R+ SS IT S S S SS Sbjct: 110 ACSTCTISTSSLSYSGT--ISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSS 161 >SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces pombe|chr 2|||Manual Length = 516 Score = 29.1 bits (62), Expect = 0.76 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 5/92 (5%) Frame = +3 Query: 252 ENCIG-KELSKI--PIPVNFSEPLSMLQ--RLTEDYEYSSVLDQAAKFDDPAQQLAYVAA 416 + CIG K+++ + +P EP+ L+ + +Y +V+ + D+ + L + Sbjct: 48 KQCIGVKDIASLRFSLPAQLLEPVGNLEYWNYVDRPDYFAVMGDSD--DELERMLGVLRW 105 Query: 417 FTVSSYATTACRTNKPFNPLLGETFECDRMAT 512 + R KP+N +LGE F C + T Sbjct: 106 WFTKDLRFVRGRVVKPYNSVLGEFFRCKWVVT 137 >SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces pombe|chr 2|||Manual Length = 399 Score = 27.9 bits (59), Expect = 1.8 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Frame = +3 Query: 270 ELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSYATTAC 449 +LS + P S+L+ ++ +E+ + F P +++ V + ++ + Sbjct: 39 DLSTLSAPSFILSGTSLLEYMSYWFEFPELFVTIVDFPTPKERMLAVLKWYITGLSREYA 98 Query: 450 RTNK-------PFNPLLGETF 491 NK P NP+LGE F Sbjct: 99 SRNKNYGTEKKPLNPILGELF 119 >SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1|||Manual Length = 1841 Score = 27.9 bits (59), Expect = 1.8 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +3 Query: 312 LSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAA 416 + MLQ T D ++ + A FDDP+ Q+ +AA Sbjct: 260 IEMLQSCTPDEKWCFIRSNFAGFDDPSFQIPELAA 294 >SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces pombe|chr 2|||Manual Length = 1154 Score = 27.5 bits (58), Expect = 2.3 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 2/90 (2%) Frame = +1 Query: 403 PTSPHSQSPRTRPPRAGQTNRSILCSARRSNATAWRP--RLASHLPKQVFASPADGGAVS 576 P S + R RP + Q +RSI ++R TA P + H+ Q +P A + Sbjct: 349 PPSAPVREKRNRPAHSAQISRSISKTSRMYRQTAEEPLNSYSLHVYPQKITAPTSPYAAT 408 Query: 577 ARGTFGAGNAGRSSPLTTKFRGKLLQILPL 666 + P T F K L++L L Sbjct: 409 QEELLAFTTIRQHLPDTLAFH-KFLELLHL 437 >SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr 2|||Manual Length = 1471 Score = 27.1 bits (57), Expect = 3.1 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = +3 Query: 255 NCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAA 416 N + K I P +FSEP+SM + D + +L +K +QQL Y+AA Sbjct: 941 NSLSKWKCLIKKPSDFSEPVSM-DFTSNDEQLVQLLQAESKLRQASQQL-YMAA 992 >SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 428 Score = 26.2 bits (55), Expect = 5.4 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = +3 Query: 609 QEFTIDHQVPGEVTPDPT-ARSRLPPSSSGNGKQVTTLKKV-TNNVPQFS 752 + F+I G P P+ + S+ PPS + + L + +NNVP F+ Sbjct: 161 RRFSISESA-GAAAPTPSPSNSKSPPSENRKNRLQNVLSPIASNNVPDFN 209 >SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 665 Score = 26.2 bits (55), Expect = 5.4 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +1 Query: 382 MTPRSNSPTSPHSQSPRTRPPRAGQTNRSILCSA 483 M+P S SP P QSP+ G + SI +A Sbjct: 318 MSPISISPAKPSPQSPKLSQSAVGHPSSSIPAAA 351 >SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 790 Score = 25.4 bits (53), Expect = 9.4 Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 9/110 (8%) Frame = +3 Query: 354 SVLDQAAKFDDPAQQLAYVAAFTVS---SYATTACRT--NKPFNPLLGETFE--CDRMAT 512 S+L++AA A +LA V +Y A RT K L + C R A Sbjct: 610 SILEKAADKVKTADRLAIYNVLLVKVALNYGVLATRTVYEKAIESLSDSEVKDMCLRFAE 669 Query: 513 SAGEPSSETGVRITRRWWRSFCEGHVRG--WQCWQEFTIDHQVPGEVTPD 656 + R+ +C+ V W+ WQEF I + P E + Sbjct: 670 METKLGEIDRARLIYIHGSQYCDPRVETDYWKAWQEFEIRYGNPEETVKE 719 >SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyces pombe|chr 2|||Manual Length = 388 Score = 25.4 bits (53), Expect = 9.4 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +3 Query: 459 KPFNPLLGETFECDRMATSAGEPSSETGVRIT 554 KP NP+LGE F + T GE + T +++ Sbjct: 110 KPLNPILGELF-TGKWNTDIGEDTELTSEQVS 140 >SPBC16G5.07c |||prohibitin |Schizosaccharomyces pombe|chr 2|||Manual Length = 354 Score = 25.4 bits (53), Expect = 9.4 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = +2 Query: 692 GQRETSYNFEEGDQQRSTIFIVGQLLGSVN 781 G+R+ + N EGD+Q + GQ + ++N Sbjct: 224 GKRQAAINVAEGDKQAEILDSEGQKIKTIN 253 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,901,572 Number of Sequences: 5004 Number of extensions: 54180 Number of successful extensions: 203 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 189 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 202 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 383374054 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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