Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30859
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117202-30|CAO82060.1| 449|Caenorhabditis elegans Hypothetical... 128 4e-30
AL117202-29|CAO82059.1| 842|Caenorhabditis elegans Hypothetical... 128 4e-30
AL117202-15|CAC42376.1| 627|Caenorhabditis elegans Hypothetical... 128 4e-30
AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical... 128 4e-30
Z81061-1|CAB02934.3| 436|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AF000195-8|AAN84853.1| 400|Caenorhabditis elegans Oxysterol bin... 40 0.003
AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol bin... 40 0.003
Z83109-4|CAB05519.1| 705|Caenorhabditis elegans Hypothetical pr... 29 2.9
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 2.9
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical... 28 6.6
AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical... 28 6.6
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 28 8.8
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 28 8.8
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 28 8.8
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 8.8
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 28 8.8
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 28 8.8
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 28 8.8
>AL117202-30|CAO82060.1| 449|Caenorhabditis elegans Hypothetical
protein Y47D3A.17d protein.
Length = 449
Score = 128 bits (309), Expect = 4e-30
Identities = 64/131 (48%), Positives = 88/131 (67%)
Frame = +3
Query: 252 ENCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSS 431
+NCIGKELSKIP+PVNFSEP+S+LQR+TED EY+++L+ AK +Q+ YVAA+ S+
Sbjct: 71 KNCIGKELSKIPMPVNFSEPISVLQRVTEDLEYANLLETGAKL-STLEQMCYVAAYAASN 129
Query: 432 YATTACRTNKPFNPLLGETFECDRMATSAGEPSSETGVRITRRWWRSFCEGHVRGWQCWQ 611
Y+TT RTNKPFNPLLGETFE DRM +E +++ + GW +Q
Sbjct: 130 YSTTCHRTNKPFNPLLGETFEFDRMDDLGWRSVTE---QVSHHPPAAAHHAEGNGWTMYQ 186
Query: 612 EFTIDHQVPGE 644
+FT+ + G+
Sbjct: 187 DFTMTSRFRGK 197
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 187 GRPRRTRVPDKPNYPLSLWSIMK 255
GR RRT VP++PN P++LWSIMK
Sbjct: 49 GRQRRTTVPERPNLPINLWSIMK 71
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 622 LTTKFRGKLLQILPLGAAFRQVPRATGNKLQL*RR*PTTFHNFHCG 759
+T++FRGK L ++P+G P AT + R+ TT HN G
Sbjct: 190 MTSRFRGKYLSVIPIGFTHVVFP-ATKSHFSY-RKITTTVHNIIVG 233
>AL117202-29|CAO82059.1| 842|Caenorhabditis elegans Hypothetical
protein Y47D3A.17c protein.
Length = 842
Score = 128 bits (309), Expect = 4e-30
Identities = 64/131 (48%), Positives = 88/131 (67%)
Frame = +3
Query: 252 ENCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSS 431
+NCIGKELSKIP+PVNFSEP+S+LQR+TED EY+++L+ AK +Q+ YVAA+ S+
Sbjct: 464 KNCIGKELSKIPMPVNFSEPISVLQRVTEDLEYANLLETGAKL-STLEQMCYVAAYAASN 522
Query: 432 YATTACRTNKPFNPLLGETFECDRMATSAGEPSSETGVRITRRWWRSFCEGHVRGWQCWQ 611
Y+TT RTNKPFNPLLGETFE DRM +E +++ + GW +Q
Sbjct: 523 YSTTCHRTNKPFNPLLGETFEFDRMDDLGWRSVTE---QVSHHPPAAAHHAEGNGWTMYQ 579
Query: 612 EFTIDHQVPGE 644
+FT+ + G+
Sbjct: 580 DFTMTSRFRGK 590
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 187 GRPRRTRVPDKPNYPLSLWSIMK 255
GR RRT VP++PN P++LWSIMK
Sbjct: 442 GRQRRTTVPERPNLPINLWSIMK 464
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 622 LTTKFRGKLLQILPLGAAFRQVPRATGNKLQL*RR*PTTFHNFHCG 759
+T++FRGK L ++P+G P AT + R+ TT HN G
Sbjct: 583 MTSRFRGKYLSVIPIGFTHVVFP-ATKSHFSY-RKITTTVHNIIVG 626
>AL117202-15|CAC42376.1| 627|Caenorhabditis elegans Hypothetical
protein Y47D3A.17b protein.
Length = 627
Score = 128 bits (309), Expect = 4e-30
Identities = 64/131 (48%), Positives = 88/131 (67%)
Frame = +3
Query: 252 ENCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSS 431
+NCIGKELSKIP+PVNFSEP+S+LQR+TED EY+++L+ AK +Q+ YVAA+ S+
Sbjct: 249 KNCIGKELSKIPMPVNFSEPISVLQRVTEDLEYANLLETGAKL-STLEQMCYVAAYAASN 307
Query: 432 YATTACRTNKPFNPLLGETFECDRMATSAGEPSSETGVRITRRWWRSFCEGHVRGWQCWQ 611
Y+TT RTNKPFNPLLGETFE DRM +E +++ + GW +Q
Sbjct: 308 YSTTCHRTNKPFNPLLGETFEFDRMDDLGWRSVTE---QVSHHPPAAAHHAEGNGWTMYQ 364
Query: 612 EFTIDHQVPGE 644
+FT+ + G+
Sbjct: 365 DFTMTSRFRGK 375
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 187 GRPRRTRVPDKPNYPLSLWSIMK 255
GR RRT VP++PN P++LWSIMK
Sbjct: 227 GRQRRTTVPERPNLPINLWSIMK 249
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 622 LTTKFRGKLLQILPLGAAFRQVPRATGNKLQL*RR*PTTFHNFHCG 759
+T++FRGK L ++P+G P AT + R+ TT HN G
Sbjct: 368 MTSRFRGKYLSVIPIGFTHVVFP-ATKSHFSY-RKITTTVHNIIVG 411
>AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical
protein Y47D3A.17a protein.
Length = 766
Score = 128 bits (309), Expect = 4e-30
Identities = 64/131 (48%), Positives = 88/131 (67%)
Frame = +3
Query: 252 ENCIGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSS 431
+NCIGKELSKIP+PVNFSEP+S+LQR+TED EY+++L+ AK +Q+ YVAA+ S+
Sbjct: 388 KNCIGKELSKIPMPVNFSEPISVLQRVTEDLEYANLLETGAKL-STLEQMCYVAAYAASN 446
Query: 432 YATTACRTNKPFNPLLGETFECDRMATSAGEPSSETGVRITRRWWRSFCEGHVRGWQCWQ 611
Y+TT RTNKPFNPLLGETFE DRM +E +++ + GW +Q
Sbjct: 447 YSTTCHRTNKPFNPLLGETFEFDRMDDLGWRSVTE---QVSHHPPAAAHHAEGNGWTMYQ 503
Query: 612 EFTIDHQVPGE 644
+FT+ + G+
Sbjct: 504 DFTMTSRFRGK 514
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 187 GRPRRTRVPDKPNYPLSLWSIMK 255
GR RRT VP++PN P++LWSIMK
Sbjct: 366 GRQRRTTVPERPNLPINLWSIMK 388
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 622 LTTKFRGKLLQILPLGAAFRQVPRATGNKLQL*RR*PTTFHNFHCG 759
+T++FRGK L ++P+G P AT + R+ TT HN G
Sbjct: 507 MTSRFRGKYLSVIPIGFTHVVFP-ATKSHFSY-RKITTTVHNIIVG 550
>Z81061-1|CAB02934.3| 436|Caenorhabditis elegans Hypothetical
protein F14H8.1 protein.
Length = 436
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/81 (46%), Positives = 59/81 (72%)
Frame = +3
Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSYAT 440
+GK+ S+ +PV +EPLS LQRL+E+ +Y+ +L++AAK D +++ YVAAF +++ +
Sbjct: 53 LGKDFSRFTVPVFMNEPLSFLQRLSENVQYNYLLEKAAKCSDDMERIEYVAAFALATVSA 112
Query: 441 TACRTNKPFNPLLGETFECDR 503
R +KPFNPLL ETFE +R
Sbjct: 113 NHKRLSKPFNPLLLETFELER 133
>Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/78 (35%), Positives = 45/78 (57%)
Frame = +3
Query: 264 GKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSYATT 443
G +LSK+ +P EP S L++L + Y ++ ++ +A DP Q++ V F +S +
Sbjct: 281 GMDLSKVVLPTFILEPRSFLEKLADYYYHADLISEAVAEPDPFQRIVKVTKFFLSGFYKK 340
Query: 444 ACRTNKPFNPLLGETFEC 497
KP+NP+LGETF C
Sbjct: 341 PKGLKKPYNPILGETFRC 358
>Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical
protein ZK1086.1a protein.
Length = 733
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/78 (35%), Positives = 45/78 (57%)
Frame = +3
Query: 264 GKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSYATT 443
G +LSK+ +P EP S L++L + Y ++ ++ +A DP Q++ V F +S +
Sbjct: 281 GMDLSKVVLPTFILEPRSFLEKLADYYYHADLISEAVAEPDPFQRIVKVTKFFLSGFYKK 340
Query: 444 ACRTNKPFNPLLGETFEC 497
KP+NP+LGETF C
Sbjct: 341 PKGLKKPYNPILGETFRC 358
>Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical
protein ZK1086.1b protein.
Length = 770
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/78 (35%), Positives = 45/78 (57%)
Frame = +3
Query: 264 GKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSYATT 443
G +LSK+ +P EP S L++L + Y ++ ++ +A DP Q++ V F +S +
Sbjct: 318 GMDLSKVVLPTFILEPRSFLEKLADYYYHADLISEAVAEPDPFQRIVKVTKFFLSGFYKK 377
Query: 444 ACRTNKPFNPLLGETFEC 497
KP+NP+LGETF C
Sbjct: 378 PKGLKKPYNPILGETFRC 395
>AF000195-8|AAN84853.1| 400|Caenorhabditis elegans Oxysterol
binding protein (osbp)related protein 4, isoform b
protein.
Length = 400
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSY-- 434
+G +L+K+ +P E S+L+ + + + + D +++ V + ++S+
Sbjct: 49 VGMDLTKVTLPTFILERRSLLEMYADFFAHPDLFIATNGNDSAEKRMIAVVRYYLNSFYA 108
Query: 435 ATTACRTNKPFNPLLGETFEC 497
A + KP+N +LGETF C
Sbjct: 109 ARKSGVAKKPYNAILGETFRC 129
>AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol
binding protein (osbp)related protein 4, isoform a
protein.
Length = 676
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSY-- 434
+G +L+K+ +P E S+L+ + + + + D +++ V + ++S+
Sbjct: 325 VGMDLTKVTLPTFILERRSLLEMYADFFAHPDLFIATNGNDSAEKRMIAVVRYYLNSFYA 384
Query: 435 ATTACRTNKPFNPLLGETFEC 497
A + KP+N +LGETF C
Sbjct: 385 ARKSGVAKKPYNAILGETFRC 405
>Z83109-4|CAB05519.1| 705|Caenorhabditis elegans Hypothetical
protein F44G3.7 protein.
Length = 705
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 396 QLAYVAAFTVSSYATTACRTNKPFNPL 476
+L ++ A TV+SY TA TN FNPL
Sbjct: 209 KLRHINAATVTSYRYTAPHTNMCFNPL 235
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -1
Query: 188 PSTQPAACDTCGQT---TMSVSLAGSDGVVLPSAPPIALSARSLSSTNITCCVSVTVSPS 18
P+T A T + T S +LA + LP++PP + + N+T + V+P+
Sbjct: 598 PTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPT 657
Query: 17 DSS 9
S+
Sbjct: 658 SST 660
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -1
Query: 188 PSTQPAACDTCGQT---TMSVSLAGSDGVVLPSAPPIALSARSLSSTNITCCVSVTVSPS 18
P+T A T + T S +LA + LP++PP + + N+T + V+P+
Sbjct: 654 PTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPT 713
Query: 17 DSS 9
S+
Sbjct: 714 SST 716
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 267 KELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQ 395
+E+SKIP+P + P + + + E+ + +V A F D Q
Sbjct: 815 REISKIPVPASVRVPSAATRNIQEELD-EAVASGAVSFTDDGQ 856
>AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1c protein.
Length = 488
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +1
Query: 70 ERAESAMGGADGSTTPSLPAKDTDIVVWPHVSQAAGCVDGRPRRTRVPDKPNYPLSLWSI 249
E+A A+ TT P K+ D++ A D +R NYP +LW+
Sbjct: 22 EKASGEPKKAEDPTTKKRPRKNEDLL-----KDAPETSDDEDQRAETAGSRNYPANLWNR 76
Query: 250 MK 255
+K
Sbjct: 77 LK 78
>AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1a protein.
Length = 486
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +1
Query: 70 ERAESAMGGADGSTTPSLPAKDTDIVVWPHVSQAAGCVDGRPRRTRVPDKPNYPLSLWSI 249
E+A A+ TT P K+ D++ A D +R NYP +LW+
Sbjct: 22 EKASGEPKKAEDPTTKKRPRKNEDLL-----KDAPETSDDEDQRAETAGSRNYPANLWNR 76
Query: 250 MK 255
+K
Sbjct: 77 LK 78
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 648 TPDPTARSRLPPSSSGNGKQVTTLKKVTNNVPQFSLWGNCW 770
TP PT + P +++ TT + T P+ + W W
Sbjct: 224 TPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWAKLW 264
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 648 TPDPTARSRLPPSSSGNGKQVTTLKKVTNNVPQFSLWGNCW 770
TP PT + P +++ TT + T P+ + W W
Sbjct: 220 TPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWAKLW 260
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 648 TPDPTARSRLPPSSSGNGKQVTTLKKVTNNVPQFSLWGNCW 770
TP PT + P +++ TT + T P+ + W W
Sbjct: 163 TPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSWAKLW 203
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 27.9 bits (59), Expect = 8.8
Identities = 36/149 (24%), Positives = 52/149 (34%), Gaps = 10/149 (6%)
Frame = +3
Query: 315 SMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAA-FTVSSYATTACRTN-KPFNPLLGET 488
S + R +E Y SS D + ++ F ATTA N + PL T
Sbjct: 762 SSVSRTSEQYSSSSPSSDTTTMDVTSTVSTTTSSTFIAKPQATTASTENPESAAPLDAST 821
Query: 489 FECDRMATSAGEP----SSETGVRITRRWWRS-FCEGHVRGWQCWQEFTIDHQVP---GE 644
+ +A S+ P SSE TR + F +R ++ G
Sbjct: 822 LDSSTIAYSSTTPIIARSSEASSTDTRSTTSTIFTSSEIRPTSSITILGVESTTASSTGS 881
Query: 645 VTPDPTARSRLPPSSSGNGKQVTTLKKVT 731
T + T S PP++ TTL T
Sbjct: 882 TTSESTTSSTEPPTTQEESNTTTTLSSTT 910
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 170 ACDTCGQTTM-SVSLAGSDGVVLPSAPPIALSARSLSSTNITCCVS 36
+CD CGQ T+ +SL + + LPS + A L S ++ +S
Sbjct: 2072 SCDECGQVTVYGISLHETGHLQLPSLNGTLICAPELISNDVLILIS 2117
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = -2
Query: 613 SCQHCQPRTCPSQKLRHHRRVMRTPVSEDGSPA 515
+C+HC + C L+ HR + S + A
Sbjct: 727 TCEHCARQLCSMSNLKRHRATCKVAASSSSNSA 759
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 170 ACDTCGQTTM-SVSLAGSDGVVLPSAPPIALSARSLSSTNITCCVS 36
+CD CGQ T+ +SL + + LPS + A L S ++ +S
Sbjct: 2070 SCDECGQVTVYGISLHETGHLQLPSLNGTLICAPELISNDVLILIS 2115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,728,750
Number of Sequences: 27780
Number of extensions: 337799
Number of successful extensions: 1556
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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