BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30859 (788 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 26 0.35 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 26 0.35 DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 25 1.1 AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.4 AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 21 9.9 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 9.9 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 26.2 bits (55), Expect = 0.35 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -1 Query: 104 PSAPPIALSARSLSSTNI 51 P+ PPI L AR+LSS+ I Sbjct: 1006 PAGPPINLEARALSSSEI 1023 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 26.2 bits (55), Expect = 0.35 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -1 Query: 104 PSAPPIALSARSLSSTNI 51 P+ PPI L AR+LSS+ I Sbjct: 1002 PAGPPINLEARALSSSEI 1019 >DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel protein. Length = 463 Score = 24.6 bits (51), Expect = 1.1 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Frame = -2 Query: 628 WSMVNSCQHCQP---RTCPSQKLRHHRRVMRTPVSEDGSPAEVAMR 500 W M SC C P +T PS+K RR RTP S + A R Sbjct: 385 WQM--SCVACSPPPRQTPPSRKESGRRRRRRTPRYNSVSKIDRASR 428 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 24.2 bits (50), Expect = 1.4 Identities = 9/26 (34%), Positives = 15/26 (57%) Frame = -1 Query: 119 DGVVLPSAPPIALSARSLSSTNITCC 42 +GV++P PPI ++ +S CC Sbjct: 423 NGVIIPDDPPIGCECKTCNS-KTKCC 447 >AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. Length = 122 Score = 21.4 bits (43), Expect = 9.9 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -2 Query: 730 VTFFKVVTCFPLPE 689 +TFF + T FP PE Sbjct: 40 ITFFCMATGFPRPE 53 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 21.4 bits (43), Expect = 9.9 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = -1 Query: 185 STQPAACDTCGQTT-MSVSLAGSDGVVLPSAPPIALSARSLSSTNIT 48 ++ PA T G TT + + A G PSA +A + +T T Sbjct: 213 ASTPATVTTTGATTTLPAASATGTGPATPSAVVATSNATAAMTTGTT 259 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 195,659 Number of Sequences: 438 Number of extensions: 3778 Number of successful extensions: 14 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 14 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 24882285 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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