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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30859
         (788 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g31030.1 68415.m03783 oxysterol-binding family protein simila...    88   7e-18
At2g31020.1 68415.m03782 oxysterol-binding family protein simila...    88   7e-18
At4g08180.3 68417.m01353 oxysterol-binding family protein simila...    87   1e-17
At4g08180.2 68417.m01352 oxysterol-binding family protein simila...    87   1e-17
At4g08180.1 68417.m01351 oxysterol-binding family protein simila...    87   1e-17
At4g12460.1 68417.m01971 oxysterol-binding family protein simila...    87   2e-17
At1g13170.1 68414.m01527 oxysterol-binding family protein simila...    85   7e-17
At4g22540.2 68417.m03252 oxysterol-binding family protein simila...    83   3e-16
At4g22540.1 68417.m03253 oxysterol-binding family protein simila...    83   3e-16
At5g59420.1 68418.m07446 oxysterol-binding family protein simila...    73   2e-13
At5g02100.1 68418.m00131 oxysterol-binding family protein simila...    71   7e-13
At3g09300.1 68416.m01104 oxysterol-binding family protein simila...    71   9e-13
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ...    33   0.22 
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ...    33   0.22 
At4g25860.1 68417.m03719 oxysterol-binding family protein contai...    31   0.66 
At2g44290.1 68415.m05511 protease inhibitor/seed storage/lipid t...    31   1.2  
At5g11550.1 68418.m01347 expressed protein                             30   1.5  
At2g24790.1 68415.m02964 zinc finger (B-box type) family protein       29   3.5  
At4g18450.1 68417.m02737 ethylene-responsive factor, putative si...    29   4.6  
At5g57240.1 68418.m07151 oxysterol-binding family protein low si...    28   6.1  
At3g23270.1 68416.m02933 regulator of chromosome condensation (R...    28   6.1  
At3g16290.1 68416.m02056 FtsH protease, putative contains simila...    28   6.1  
At1g77620.1 68414.m09037 expressed protein                             28   6.1  
At1g27750.1 68414.m03391 ubiquitin system component Cue domain-c...    28   6.1  
At4g09730.1 68417.m01598 DEAD/DEAH box helicase, putative RNA he...    28   8.1  
At4g01750.1 68417.m00227 expressed protein T15B16.8                    28   8.1  
At2g11570.1 68415.m01245 hypothetical protein                          28   8.1  

>At2g31030.1 68415.m03783 oxysterol-binding family protein similar
           to SWH1 [Saccharomyces cerevisiae] GI:402658; contains
           Pfam profile PF01237: Oxysterol-binding protein
          Length = 489

 Score = 87.8 bits (208), Expect = 7e-18
 Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
 Frame = +3

Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAA---KFDDPAQQLAYVAAFTVSS 431
           IGK+L+K+ +PV F+EPLS LQ+  ED EYS +LDQA+   K  +   ++  VAAF VS 
Sbjct: 135 IGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLLDQASEWGKRGNNLMRILNVAAFAVSG 194

Query: 432 YATTACRTNKPFNPLLGETFECD 500
           YA+T  R  KPFNP+LGET+E D
Sbjct: 195 YASTKGRICKPFNPMLGETYEAD 217


>At2g31020.1 68415.m03782 oxysterol-binding family protein similar
           to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 760

 Score = 87.8 bits (208), Expect = 7e-18
 Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
 Frame = +3

Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAA---KFDDPAQQLAYVAAFTVSS 431
           IGK+L+K+ +PV F+EPLS LQ+  ED EYS +LDQA+   K  +   ++  VAAF VS 
Sbjct: 402 IGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLLDQASEWGKRGNNLMRILNVAAFAVSG 461

Query: 432 YATTACRTNKPFNPLLGETFECD 500
           YA+T  R  KPFNP+LGET+E D
Sbjct: 462 YASTEGRICKPFNPMLGETYEAD 484


>At4g08180.3 68417.m01353 oxysterol-binding family protein similar
           to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 813

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 3/83 (3%)
 Frame = +3

Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQA---AKFDDPAQQLAYVAAFTVSS 431
           IGK+L+K+ +PV F+EPLS LQ+  ED EYS +LD+A    K  +   ++  VAAF VS 
Sbjct: 445 IGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLLDRAFEYGKRGNSLMRILNVAAFAVSG 504

Query: 432 YATTACRTNKPFNPLLGETFECD 500
           YA+T  R  KPFNPLLGET+E D
Sbjct: 505 YASTEGRICKPFNPLLGETYEAD 527


>At4g08180.2 68417.m01352 oxysterol-binding family protein similar
           to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 813

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 3/83 (3%)
 Frame = +3

Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQA---AKFDDPAQQLAYVAAFTVSS 431
           IGK+L+K+ +PV F+EPLS LQ+  ED EYS +LD+A    K  +   ++  VAAF VS 
Sbjct: 445 IGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLLDRAFEYGKRGNSLMRILNVAAFAVSG 504

Query: 432 YATTACRTNKPFNPLLGETFECD 500
           YA+T  R  KPFNPLLGET+E D
Sbjct: 505 YASTEGRICKPFNPLLGETYEAD 527


>At4g08180.1 68417.m01351 oxysterol-binding family protein similar
           to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 814

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 3/83 (3%)
 Frame = +3

Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQA---AKFDDPAQQLAYVAAFTVSS 431
           IGK+L+K+ +PV F+EPLS LQ+  ED EYS +LD+A    K  +   ++  VAAF VS 
Sbjct: 446 IGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLLDRAFEYGKRGNSLMRILNVAAFAVSG 505

Query: 432 YATTACRTNKPFNPLLGETFECD 500
           YA+T  R  KPFNPLLGET+E D
Sbjct: 506 YASTEGRICKPFNPLLGETYEAD 528


>At4g12460.1 68417.m01971 oxysterol-binding family protein similar
           to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 694

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
 Frame = +3

Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQL---AYVAAFTVSS 431
           +GK+L+++ +PV F+EP+S LQ+  ED EYS +LDQA ++    + L     VAAF VS 
Sbjct: 333 VGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDQAYEYGKSGKSLLRALNVAAFAVSG 392

Query: 432 YATTACRTNKPFNPLLGETFECDRMATSAGEPSSETGVRITRRWWRSFCEGHVRGWQCW 608
           YA+T  R  KPFNPLLGET+E D         S +     T       CEG  +GW+ W
Sbjct: 393 YASTEGRHCKPFNPLLGETYEADFPEKGIRFFSEKVSHHPT--VIACHCEG--KGWKFW 447


>At1g13170.1 68414.m01527 oxysterol-binding family protein similar
           to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus
           cuniculus}; contains Pfam profiles PF00169: PH domain,
           PF01237: Oxysterol-binding protein
          Length = 816

 Score = 84.6 bits (200), Expect = 7e-17
 Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
 Frame = +3

Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQL---AYVAAFTVSS 431
           IGK+LS + +PV F+EPLS LQ+  ED EYS ++D+A ++     +L     +AAF VS 
Sbjct: 442 IGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLIDRALEWGKQGNELMRILNIAAFAVSG 501

Query: 432 YATTACRTNKPFNPLLGETFECD 500
           YA+T  R  KPFNPLLGET+E D
Sbjct: 502 YASTEGRQCKPFNPLLGETYEAD 524


>At4g22540.2 68417.m03252 oxysterol-binding family protein similar
           to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus
           cuniculus}; contains Pfam profiles PF00169: PH domain,
           PF01237: Oxysterol-binding protein
          Length = 510

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 50/119 (42%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
 Frame = +3

Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQA---AKFDDPAQQLAYVAAFTVSS 431
           +GK+L+++ +PV F+EP+S LQ+  ED EYS +LD+A    K  +   +   VAAF VS 
Sbjct: 142 VGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEHGKSGNGLLRALNVAAFAVSG 201

Query: 432 YATTACRTNKPFNPLLGETFECDRMATSAGEPSSETGVRITRRWWRSFCEGHVRGWQCW 608
           YA+T  R  KPFNPLLGET+E D         S +     T       CEG  +GW+ W
Sbjct: 202 YASTEGRHCKPFNPLLGETYEADFPEKGIRFFSEKVSHHPT--VIACHCEG--KGWKFW 256


>At4g22540.1 68417.m03253 oxysterol-binding family protein similar
           to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus
           cuniculus}; contains Pfam profiles PF00169: PH domain,
           PF01237: Oxysterol-binding protein
          Length = 721

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 50/119 (42%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
 Frame = +3

Query: 261 IGKELSKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQA---AKFDDPAQQLAYVAAFTVSS 431
           +GK+L+++ +PV F+EP+S LQ+  ED EYS +LD+A    K  +   +   VAAF VS 
Sbjct: 353 VGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEHGKSGNGLLRALNVAAFAVSG 412

Query: 432 YATTACRTNKPFNPLLGETFECDRMATSAGEPSSETGVRITRRWWRSFCEGHVRGWQCW 608
           YA+T  R  KPFNPLLGET+E D         S +     T       CEG  +GW+ W
Sbjct: 413 YASTEGRHCKPFNPLLGETYEADFPEKGIRFFSEKVSHHPT--VIACHCEG--KGWKFW 467


>At5g59420.1 68418.m07446 oxysterol-binding family protein similar
           to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus
           cuniculus}; contains Pfam profile PF01237:
           Oxysterol-binding protein
          Length = 457

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = +3

Query: 261 IGKEL-SKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSYA 437
           IG ++ S + +PV   EP++MLQ++ E  EYS +LDQA + +DP  +L Y +++ +S Y 
Sbjct: 77  IGSDITSMVTLPVVIFEPMTMLQKMAEIMEYSHLLDQADECEDPYLRLVYASSWAISVYY 136

Query: 438 TTACRTNKPFNPLLGETFE 494
               RT KPFNP+LGET+E
Sbjct: 137 AFQ-RTWKPFNPILGETYE 154


>At5g02100.1 68418.m00131 oxysterol-binding family protein similar
           to SWH1 [Saccharomyces cerevisiae] GI:402658; contains
           Pfam profile PF01237: Oxysterol-binding protein
          Length = 453

 Score = 71.3 bits (167), Expect = 7e-13
 Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = +3

Query: 261 IGKEL-SKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSYA 437
           IG ++ S + +PV   EP++MLQ++ E  EYS +LD A K +DP  ++ Y +++ +S Y 
Sbjct: 77  IGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDMADKTEDPYMRMVYASSWAISVYY 136

Query: 438 TTACRTNKPFNPLLGETFE 494
               RT KPFNP+LGET+E
Sbjct: 137 AYQ-RTWKPFNPILGETYE 154


>At3g09300.1 68416.m01104 oxysterol-binding family protein similar
           to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens};
           contains Pfam profile PF01237: Oxysterol-binding protein
          Length = 458

 Score = 70.9 bits (166), Expect = 9e-13
 Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = +3

Query: 261 IGKEL-SKIPIPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSYA 437
           IG ++ S + +PV   EP++MLQ++ E  EYS +LD A K +DP  ++ Y +++ +S Y 
Sbjct: 82  IGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSHLLDMADKTEDPYLRMVYASSWAISVYY 141

Query: 438 TTACRTNKPFNPLLGETFE 494
               RT KPFNP+LGET+E
Sbjct: 142 AFQ-RTWKPFNPILGETYE 159


>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 407

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 23/69 (33%), Positives = 31/69 (44%)
 Frame = +1

Query: 382 MTPRSNSPTSPHSQSPRTRPPRAGQTNRSILCSARRSNATAWRPRLASHLPKQVFASPAD 561
           ++PR  SP SPH + P +   R G T        RR  A+  R R  S  P + + SP  
Sbjct: 232 LSPRRRSPDSPHRRRPGSPIRRRGDT------PPRRRPASPSRGRSPSSPPPRRYRSPPR 285

Query: 562 GGAVSARGT 588
           G     RG+
Sbjct: 286 GSPRRIRGS 294


>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 414

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 23/69 (33%), Positives = 31/69 (44%)
 Frame = +1

Query: 382 MTPRSNSPTSPHSQSPRTRPPRAGQTNRSILCSARRSNATAWRPRLASHLPKQVFASPAD 561
           ++PR  SP SPH + P +   R G T        RR  A+  R R  S  P + + SP  
Sbjct: 239 LSPRRRSPDSPHRRRPGSPIRRRGDT------PPRRRPASPSRGRSPSSPPPRRYRSPPR 292

Query: 562 GGAVSARGT 588
           G     RG+
Sbjct: 293 GSPRRIRGS 301


>At4g25860.1 68417.m03719 oxysterol-binding family protein contains
           Pfam profile PF01237: Oxysterol-binding protein
          Length = 386

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = +3

Query: 264 GKELSKIPIPVNFSEPLSMLQRLTED-YEYSS--VLDQAAKFDDPAQQLAYVAAFTVSSY 434
           G +L+   +P     P S LQ   E  Y +    +L + ++ + P ++L  V  + +S+ 
Sbjct: 46  GSDLTNFQLPPQLILPRSRLQCYGEMIYSFGGQDLLGECSRRNIPIERLKSVVTWNISTL 105

Query: 435 ATTACRTNKPFNPLLGET 488
                  + P+NP+LGET
Sbjct: 106 RPVVVGMS-PYNPILGET 122


>At2g44290.1 68415.m05511 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein (YLS3) similar to
           lipid transfer protein Picea abies GI:2627141; contains
           Pfam profile: PF00234: Protease inhibitor/seed
           storage/LTP family; identical to cDNA YLS3 mRNA for
           non-specific lipid transfer protein (nLTP) like protein,
           partial cds GI:13122283
          Length = 205

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +3

Query: 618 TIDHQVPGEVTPDPTARSRLPPSSSGNGKQVTTLKKVTNNVPQFS 752
           T+    P     +PT+ S  P SS+GN    TT    TN+   FS
Sbjct: 139 TVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFS 183


>At5g11550.1 68418.m01347 expressed protein 
          Length = 314

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 400 SPTSPHSQSPRTRPPRAGQTNRSILCSARRSNATAWR 510
           SPTSPH Q PR +      ++ S   S  +S  T WR
Sbjct: 32  SPTSPHQQQPRRKATTTSSSSSSSSTSTSQS-FTQWR 67


>At2g24790.1 68415.m02964 zinc finger (B-box type) family protein
          Length = 294

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/65 (27%), Positives = 25/65 (38%)
 Frame = +1

Query: 400 SPTSPHSQSPRTRPPRAGQTNRSILCSARRSNATAWRPRLASHLPKQVFASPADGGAVSA 579
           SP    ++  R R  R  +     +  A R      RPR+     K+  +   DGG V  
Sbjct: 225 SPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSRENDGGDVGV 284

Query: 580 RGTFG 594
            G FG
Sbjct: 285 YGGFG 289


>At4g18450.1 68417.m02737 ethylene-responsive factor, putative
           similar to ethylene response factor 1 GB:AAD03544
           GI:4128208 from [Arabidopsis thaliana]; EREBP-1
           (Ethylene-inducible DNA binding protein that interact
           with an ethylene-responsive element) - Nicotiana
           tabacum, PATCHX:D1007899
          Length = 303

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +3

Query: 288 IPVNFSEPLSMLQRLTEDYEYSSVLDQAAKFDDPAQQ--LAYVAAFTVSSYATTACRTNK 461
           IP    E L  L   TED E++ +LD  A F +      L      + S  +  +C+T K
Sbjct: 50  IPEGSREMLQSLDMSTEDQEWTEILDAIASFPNKTNHDPLTNPTIDSCSLSSRVSCKTRK 109


>At5g57240.1 68418.m07151 oxysterol-binding family protein low
           similarity to SP|P22059 Oxysterol-binding protein 1
           {Homo sapiens}; contains Pfam profile PF01237:
           Oxysterol-binding protein
          Length = 379

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
 Frame = +3

Query: 264 GKELSKIPIPVNFSEPLSMLQ---RLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSY 434
           G +L+   +P   +   S LQ    +   ++   +L + ++ D P +++  +  + +S+ 
Sbjct: 40  GSDLTNFQLPPQMNLARSQLQCYGEIVYSFDGHDLLGECSRRDKPIERMKAMVTWYISTL 99

Query: 435 ATTACRTNKPFNPLLGET 488
                    P+NP++GET
Sbjct: 100 RPLIFGL-APYNPVIGET 116


>At3g23270.1 68416.m02933 regulator of chromosome condensation
           (RCC1) family protein contains Pfam domain PF00415:
           Regulator of chromosome condensation (RCC1); similar to
           zinc finger protein (GI:15811367) [Arabidopsis
           thaliana]; similar to chromosome condensation regulator
           protein (GI:22770461) [Cicer arietinum]
          Length = 1045

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = +1

Query: 388 PRSNSPTSP-HSQSPRTR---PPRAGQTNRSILCSARRSN 495
           P S SP  P  S SP  R   PPR    +RS++ S R++N
Sbjct: 767 PSSPSPPPPPRSSSPYARRPSPPRTSGFSRSVIDSLRKTN 806


>At3g16290.1 68416.m02056 FtsH protease, putative contains
           similarity to cell division protein FtsH GI:1652085 from
           [Synechocystis sp. PCC 6803]
          Length = 876

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 579 EGHVRGWQCWQEFTIDHQVPGEVTPDPTARSRLP 680
           EG+ R W+ W E  ID Q     TP P  R  +P
Sbjct: 166 EGNKRFWEQWDELGIDVQCVNAYTP-PVKRPPVP 198


>At1g77620.1 68414.m09037 expressed protein
          Length = 1151

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 16  SEGETVTETQQVIFVEDKERAESAMGGADGS 108
           S+ E + E   V+ +ED+E     +G  DG+
Sbjct: 237 SQSEGIAEASSVVLIEDQEEKRGCLGFLDGA 267


>At1g27750.1 68414.m03391 ubiquitin system component Cue
           domain-containing protein very low similarity to ASC-1
           complex subunit P100 [Homo sapiens] GI:12061187;
           contains Pfam profile PF02845: CUE domain
          Length = 1973

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 385 TPRSNSPTSPHSQSPRTRPPRAGQTNRSILCSARRSNATA 504
           TP S  P SP  Q P   PP +    RS++  +  + AT+
Sbjct: 769 TPTSQIPPSPFVQQPIYPPPNSSWDTRSLISPSGDAVATS 808


>At4g09730.1 68417.m01598 DEAD/DEAH box helicase, putative RNA
           helicase -Mus musculus,PIR2:I84741
          Length = 621

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 22/88 (25%), Positives = 31/88 (35%)
 Frame = +1

Query: 382 MTPRSNSPTSPHSQSPRTRPPRAGQTNRSILCSARRSNATAWRPRLASHLPKQVFASPAD 561
           ++ + NS   P S SP  R        R    S+      A  P   S  PK+       
Sbjct: 527 VSKQRNSRDKPSSSSPPARSTGGKTPVRKSSSSSFSKPRKASSPPEKSSKPKRKILKTVG 586

Query: 562 GGAVSARGTFGAGNAGRSSPLTTKFRGK 645
             +++ARG  G+            FRGK
Sbjct: 587 SRSIAARGKTGSDRRPGKKLSVVGFRGK 614


>At4g01750.1 68417.m00227 expressed protein T15B16.8
          Length = 367

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/57 (28%), Positives = 22/57 (38%)
 Frame = +3

Query: 309 PLSMLQRLTEDYEYSSVLDQAAKFDDPAQQLAYVAAFTVSSYATTACRTNKPFNPLL 479
           PL +         Y+S L   AK +     LA  A F  ++     C  + PF P L
Sbjct: 58  PLLLFPNKVSSPSYASSLSPHAKSEWRNYTLAQAAKFVATNGTVIVCAVSSPFLPFL 114


>At2g11570.1 68415.m01245 hypothetical protein
          Length = 305

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 443 GGRVRGDCECGDVGELLRGVIELG 372
           GG  RGDC+ G  G   RGV E G
Sbjct: 78  GGDFRGDCDTGFDGGDYRGVAETG 101


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,062,869
Number of Sequences: 28952
Number of extensions: 322471
Number of successful extensions: 1459
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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