Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30857
         (883 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   1.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.7  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   9.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.7  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 220 YKLVTERVSFN*DLLSESIRSLCIWTI 140
           Y + T  VSF+  L S  IR+  IW +
Sbjct: 547 YDIYTRLVSFSDRLKSRGIRTAAIWPL 573



 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 298 ISFIERLKYRILFEKSLWPI 357
           +SF +RLK R +   ++WP+
Sbjct: 554 VSFSDRLKSRGIRTAAIWPL 573


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3

Query: 666 HDSTLWEEVFYSSGNK 713
           H   LW E FY +  K
Sbjct: 300 HGQLLWREFFYCAATK 315


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 393 NVKEQGDLVRKLKEEKAPEIDIKKAVAELKTRKKILED 506
           N+    D    L   K  E++  + +  LK  KK+LED
Sbjct: 113 NLLADYDFSETLTRAKFEELNNDQFLKTLKPVKKVLED 150


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 175 IIDLS*MRHVLSLVYKCSVFSKQVTVLVIIYVFHT 279
           I+  + + H+LS+V  CS    +V      Y  +T
Sbjct: 319 IMSAAAVEHILSIVNTCSQIPSEVEDKYTTYFLNT 353


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 288 TADCVKDVNDY 256
           T DCV+ VNDY
Sbjct: 312 TLDCVQLVNDY 322


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,151
Number of Sequences: 336
Number of extensions: 4004
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)