Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30856
         (765 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    30   4.0  
AY118370-1|AAM48399.1|  359|Drosophila melanogaster RE12410p pro...    29   5.3  
AE013599-2604|AAF57760.1|  359|Drosophila melanogaster CG10911-P...    29   5.3  
AF145684-1|AAD38659.1| 1658|Drosophila melanogaster BcDNA.LD2387...    29   7.0  
AE014297-845|AAF54313.1| 1658|Drosophila melanogaster CG11970-PA...    29   7.0  

>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 374 RSAECMNQMSETAVPLVLSSITIATTSHQ*G 282
           +  EC  Q+S  ++ LV+S+IT+AT +H  G
Sbjct: 701 QQCECHAQVSIASLLLVISAITVATNTHDYG 731


>AY118370-1|AAM48399.1|  359|Drosophila melanogaster RE12410p
           protein.
          Length = 359

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = -1

Query: 765 VPNHLAQGLSS*TDRSTDG--CSTEHNTPARK--RKSSTDYSEPPTSN*VISGLRSRDAR 598
           +P+      +S TD STD    STE +T +     +SSTD S   T +   S   S  A 
Sbjct: 190 IPSESTSTQASSTDSSTDSTSASTESSTDSSSVSTESSTDSSSVSTESSTDSSTDSSSAS 249

Query: 597 VKKKTDS 577
            +  TDS
Sbjct: 250 TESSTDS 256


>AE013599-2604|AAF57760.1|  359|Drosophila melanogaster CG10911-PA
           protein.
          Length = 359

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = -1

Query: 765 VPNHLAQGLSS*TDRSTDG--CSTEHNTPARK--RKSSTDYSEPPTSN*VISGLRSRDAR 598
           +P+      +S TD STD    STE +T +     +SSTD S   T +   S   S  A 
Sbjct: 190 IPSESTSTQASSTDSSTDSTSASTESSTDSSSVSTESSTDSSSVSTESSTDSSTDSSSAS 249

Query: 597 VKKKTDS 577
            +  TDS
Sbjct: 250 TESSTDS 256


>AF145684-1|AAD38659.1| 1658|Drosophila melanogaster BcDNA.LD23876
            protein.
          Length = 1658

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 16/64 (25%), Positives = 27/64 (42%)
 Frame = -2

Query: 758  ITLPKG*VLKQIAARTAVLPSTTPRPGNGSRLQTIPSPRHRTELYPDFGAVMHVLRKKPI 579
            ITL      KQ+   T ++ +T+  P  G+    +P    +T + P    ++H    K I
Sbjct: 1368 ITLSPNQTTKQLPTMTRIVSATSTTPATGNASTVVPKIIGKTTVLPGKPLLLHAKTLKQI 1427

Query: 578  ASIS 567
               S
Sbjct: 1428 GGSS 1431


>AE014297-845|AAF54313.1| 1658|Drosophila melanogaster CG11970-PA
            protein.
          Length = 1658

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 16/64 (25%), Positives = 27/64 (42%)
 Frame = -2

Query: 758  ITLPKG*VLKQIAARTAVLPSTTPRPGNGSRLQTIPSPRHRTELYPDFGAVMHVLRKKPI 579
            ITL      KQ+   T ++ +T+  P  G+    +P    +T + P    ++H    K I
Sbjct: 1368 ITLSPNQTTKQLPTMTRIVSATSTTPATGNASTVVPKIIGKTTVLPGKPLLLHAKTLKQI 1427

Query: 578  ASIS 567
               S
Sbjct: 1428 GGSS 1431


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,343,979
Number of Sequences: 53049
Number of extensions: 796058
Number of successful extensions: 2031
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2031
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)