Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30855
         (876 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.6  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 766 VFNAGDRTA-SVPYSAWGPRFDGFDTV 843
           V+N  D    + PYSA GP +  + TV
Sbjct: 284 VYNPPDHIQQATPYSAPGPTYSTWSTV 310


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 258 DTLSQSHTKIVEENQHFKRSL 320
           D LS    K  + NQHF+R +
Sbjct: 205 DILSDICDKFEQINQHFRRQI 225


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 12/59 (20%), Positives = 28/59 (47%)
 Frame = -1

Query: 747 W*FFTNFNFSVRVNVY*ILDNARKKDINS*KIPSLYKPTFESLPFLNTFKFSHCYRKAL 571
           W F    N + R+  + ++ N  +K+++  K    ++P+F +  F    + +   RK +
Sbjct: 257 WEFDQIVNVAYRMETWNVVFNGSRKNLDVMKSFVNFRPSFTAARFFEIDRINAESRKPI 315


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 258 DTLSQSHTKIVEENQHFKRSL 320
           D LS    K  + NQHF+R +
Sbjct: 161 DILSDICDKFEQINQHFRRQI 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,489
Number of Sequences: 336
Number of extensions: 3825
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)