Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30854
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.55 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   2.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   6.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.0  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 450 LFV*NQDFFNENIKRMIFLRKLL 518
           L +  ++FF+  IKRM+ L K L
Sbjct: 66  LIIKQEEFFSPKIKRMVLLHKTL 88



 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 716 EIQYIRVFTMTTAI*KALEAIWSLTCQI 633
           EI  +R+FT+   +   + A +S TC I
Sbjct: 292 EITALRLFTIDNKLLFGVLAYYSTTCDI 319


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = +3

Query: 60  QHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRARSLT----YGEIFNNNDLEKNPKRLR 227
           Q+ +Y +      C  A S PTP++ +  +   A S T    + E F N +  K+P+   
Sbjct: 183 QYQSYQILLPTPTCSEASSSPTPSHSSESSFSAASSYTNTIYHQENFENYE-PKSPEDEE 241

Query: 228 VLDSM 242
           +LD++
Sbjct: 242 LLDAI 246


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 375 MVIDINIIRLRMKSFVVIRVLLNSDYIYIFKIS 277
           M +DI  I  +  SFVV  ++ N+  +Y+  +S
Sbjct: 217 MGLDIASITAQASSFVVWPLVENNPTLYLIPVS 249


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 375 MVIDINIIRLRMKSFVVIRVLLNSDYIYIFKIS 277
           M +DI  I  +  SFVV  ++ N+  +Y+  +S
Sbjct: 217 MGLDIASITAQASSFVVWPLVENNPTLYLIPVS 249


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 595 EDKPKKFHFLVLQIWH 642
           E+KPKK    +  IWH
Sbjct: 159 ENKPKKIRSKLGSIWH 174


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 561 VNPVGFARTKYRR*TKEVSLLSF 629
           +N  GFA  +YR   KE++ ++F
Sbjct: 219 MNHPGFADKEYRARRKEIAEIAF 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,048
Number of Sequences: 336
Number of extensions: 3873
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)