Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30854
(828 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0633 - 4735298-4735485,4736083-4736114,4736203-4736297,473... 64 1e-10
06_03_0650 + 23157130-23157582,23157687-23157898,23157982-231581... 61 9e-10
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 59 4e-09
03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171 58 6e-09
03_05_0705 - 26965352-26965542,26965732-26965763,26966141-269662... 58 9e-09
02_04_0615 - 24410124-24410290,24410592-24410623,24410717-244108... 57 1e-08
03_05_0704 - 26953474-26953643,26953770-26953801,26953915-269540... 57 2e-08
03_06_0243 + 32598782-32598793,32599037-32599123,32601052-326012... 56 3e-08
02_05_0272 - 27348537-27348728,27349035-27349192,27349292-273493... 56 3e-08
06_03_1494 + 30554997-30555608,30555707-30555915,30556006-305561... 56 3e-08
02_05_1337 - 35780076-35780290,35780377-35780408,35780490-357805... 56 5e-08
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 55 6e-08
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 54 2e-07
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 54 2e-07
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 46 3e-05
01_01_1197 - 9630506-9630681,9630774-9630805,9630894-9630988,963... 38 0.007
07_01_1069 - 9493001-9493176,9493269-9493300,9493405-9493499,949... 38 0.010
04_04_0049 - 22356139-22357649,22357764-22357995 31 1.1
08_01_0054 - 367770-370166 29 4.5
>07_01_0633 -
4735298-4735485,4736083-4736114,4736203-4736297,
4736414-4736487,4736682-4736817,4736902-4736965,
4737101-4737166,4737265-4737446,4737824-4737948,
4738031-4738169,4738250-4738369,4738675-4738746,
4738900-4738935,4739633-4739749,4739821-4739953,
4740053-4740156,4740243-4740370,4740880-4741010,
4741561-4741757,4743906-4744583
Length = 938
Score = 64.5 bits (150), Expect = 1e-10
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RPT YH + ++ R ++ Q L Y LC+ YARC R+VS P YYAHLA RAR
Sbjct: 838 RPTHYHVLHDENRFSADQLQMLTYNLCYTYARCTRSVSVVPPAYYAHLAAFRAR 891
>06_03_0650 + 23157130-23157582,23157687-23157898,23157982-23158128,
23158214-23158347,23158442-23158551,23158711-23158817,
23159045-23159183,23159286-23159402,23159737-23159844,
23159927-23159998,23160108-23160230,23160336-23160495,
23160585-23160706,23160825-23160962,23161042-23161184,
23161305-23161367,23161567-23161630,23161709-23161844,
23162123-23162196,23162764-23162858,23162951-23162982,
23163104-23163276
Length = 973
Score = 61.3 bits (142), Expect = 9e-10
Identities = 29/70 (41%), Positives = 37/70 (52%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRARSLTYGE 182
RP YH + ++ +E Q L LC+ YARC R+VS P YYAHLA RAR E
Sbjct: 878 RPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPE 937
Query: 183 IFNNNDLEKN 212
+ N K+
Sbjct: 938 MSENQTTSKS 947
>04_04_0824 - 28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 59.3 bits (137), Expect = 4e-09
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RP YH + ++ + +E Q L LC+ YARC R+VS P YYAHLA RAR
Sbjct: 1096 RPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRAR 1149
>03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171
Length = 1054
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RPT YH + ++ +E Q L + LC+ +ARC R VS P YYAHLA R R
Sbjct: 966 RPTHYHVLWDENNFRSDEVQQLIHNLCYTFARCTRPVSLVPPAYYAHLAAYRGR 1019
>03_05_0705 -
26965352-26965542,26965732-26965763,26966141-26966235,
26966737-26966810,26966894-26967029,26967137-26967200,
26967285-26967350,26967445-26967587,26969314-26969407,
26969779-26969902,26970016-26970193,26970273-26970395,
26970884-26970955,26971032-26971139,26972511-26972627,
26972757-26972889,26973209-26973299,26974642-26974722,
26975342-26975421,26975500-26975705,26977417-26977893
Length = 894
Score = 58.0 bits (134), Expect = 9e-09
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +3
Query: 6 PTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
PT Y+ + ++ + Q L Y+LC+ YARC R+VS P YYAHLA RAR
Sbjct: 794 PTHYYVLFDENNFSADALQTLTYHLCYTYARCTRSVSIVPPVYYAHLAASRAR 846
>02_04_0615 -
24410124-24410290,24410592-24410623,24410717-24410811,
24413636-24413706,24414278-24414410,24414488-24414551,
24414628-24414690,24414784-24414924,24415130-24415203,
24415346-24415470,24415545-24415686,24415775-24415777
Length = 369
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRARS 167
RPT Y + ++ + Q L + LC++YARC RAVS P YYAHLA R RS
Sbjct: 276 RPTHYTVIFDENHFTADGLQLLTHNLCYMYARCTRAVSIVPPLYYAHLAAARGRS 330
>03_05_0704 - 26953474-26953643,26953770-26953801,26953915-26954009,
26954107-26954180,26954283-26954412,26954522-26954585,
26954660-26954722,26954795-26954937,26955386-26955523,
26955610-26955731,26955805-26955976,26956559-26956630,
26956753-26956887,26956987-26957103,26957184-26957316,
26957455-26957561,26958060-26958077,26958235-26958379,
26958472-26958671,26960744-26961421
Length = 935
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RPT YH + ++ + Q L Y L + YARC RAVS P YYAHL RAR
Sbjct: 841 RPTHYHVLLDENGFKADTLQTLTYNLSYTYARCTRAVSIVPPAYYAHLGAFRAR 894
>03_06_0243 + 32598782-32598793,32599037-32599123,32601052-32601257,
32601342-32601453,32601628-32601724,32601815-32601924,
32601996-32602153,32602559-32602697,32602776-32602892,
32603084-32603140,32603280-32603351,32603617-32603736,
32603818-32603983,32604067-32604188,32604373-32604447,
32604636-32604775,32604860-32604922,32605002-32605065,
32605161-32605296,32605401-32605474,32605570-32605664,
32605761-32605792,32606344-32606474,32606595-32606827,
32606916-32607723,32607815-32607967
Length = 1192
Score = 56.4 bits (130), Expect = 3e-08
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLA------CLRAR 164
RPT YH + ++ +E Q L LC++YARC AVS P YY+HLA C++
Sbjct: 713 RPTHYHVLYDENHFTADELQTLTNNLCYIYARCTHAVSVVPPAYYSHLAASHAHCCIKGH 772
Query: 165 SLTYGEI-FNNNDLEKN-PKRLRVLDSMLKQSVCSSSNKM 278
S G N +D+ KN L++L +L + + K+
Sbjct: 773 SSGSGSTPGNEHDIVKNSAPTLQILVKVLDFQIVPLTMKL 812
>02_05_0272 - 27348537-27348728,27349035-27349192,27349292-27349323,
27349420-27349514,27349614-27349687,27349800-27349878,
27350015-27350078,27350156-27350218,27350300-27350442,
27350566-27350703,27350792-27350913,27350993-27351158,
27351276-27351398,27351609-27351680,27351773-27351880,
27352481-27352597,27352727-27352865,27352974-27353080,
27353167-27353276,27353892-27354025,27354106-27354255,
27354329-27354549,27354647-27355318
Length = 1092
Score = 56.4 bits (130), Expect = 3e-08
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RP YH + ++ + + Q L LC+ YARC R+VS P YYAHLA RAR
Sbjct: 938 RPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRAR 991
>06_03_1494 + 30554997-30555608,30555707-30555915,30556006-30556155,
30556254-30556312,30556852-30556961,30557216-30557322,
30557443-30557581,30557705-30557821,30557918-30558025,
30558221-30558292,30558783-30558948,30559044-30559165,
30559245-30559382,30559462-30559604,30559699-30559761,
30560107-30560170,30560238-30560373,30560478-30560551,
30560640-30560734,30560829-30560860,30560973-30561175
Length = 972
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RP YH + ++ + Q L LC+ YARC R+VS P YYAHLA RAR
Sbjct: 867 RPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRAR 920
>02_05_1337 - 35780076-35780290,35780377-35780408,35780490-35780584,
35780670-35780743,35780851-35780986,35781072-35781135,
35781333-35781395,35781514-35781656,35781752-35781889,
35781973-35782094,35782210-35782375,35782647-35782652,
35782988-35783059,35783241-35783348,35783719-35783848,
35783964-35784070,35784896-35785005,35785302-35785435,
35785528-35785982,35786068-35786595
Length = 965
Score = 55.6 bits (128), Expect = 5e-08
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RP YH + ++ + Q L LC+ YARC R+VS P YYAHLA RAR
Sbjct: 856 RPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRAR 909
>07_03_0329 + 16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 55.2 bits (127), Expect = 6e-08
Identities = 23/54 (42%), Positives = 31/54 (57%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RP+ YH + +D ++ Q + LC+LY C R+VS P P YYAH RAR
Sbjct: 1008 RPSHYHVLRDDNNFTADQLQSVTNNLCYLYTSCTRSVSIPPPVYYAHKLAFRAR 1061
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RPT Y+++ ++ ++ Q L Y LC ++ARC + VS TP YYA LA R R
Sbjct: 966 RPTHYYSLLDEHGFASDDLQKLVYNLCFVFARCTKPVSLATPVYYADLAAYRGR 1019
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RPT Y+++ ++ ++ Q L Y LC ++ARC + VS TP YYA LA R R
Sbjct: 932 RPTHYYSLLDEHGFASDDLQKLVYNLCFVFARCTKPVSLATPVYYADLAAYRGR 985
>03_06_0327 - 33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/78 (38%), Positives = 35/78 (44%), Gaps = 18/78 (23%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVS------------------YPTP 128
RPT YH + ++ + Q L LC+ YARC RAVS Y P
Sbjct: 942 RPTHYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVGRRRSRPNFIKIEIVSVYFPP 1001
Query: 129 TYYAHLACLRARSLTYGE 182
YYAHLA RAR GE
Sbjct: 1002 AYYAHLAAFRARYYVEGE 1019
>01_01_1197 - 9630506-9630681,9630774-9630805,9630894-9630988,
9631569-9631642,9631732-9631843,9631967-9632030,
9632210-9632275,9632396-9632526,9632884-9633021,
9633115-9633227,9633306-9633471,9633588-9633701,
9633791-9633853,9633953-9634060,9634143-9634259,
9634343-9634505,9634646-9634743,9634852-9634949,
9635054-9635190,9635309-9635530,9635625-9635830,
9636758-9636845,9638085-9638668
Length = 1054
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLA 149
RPT YH + ++ ++ Q L + L ++Y R A+S P YAHLA
Sbjct: 958 RPTHYHILHDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLA 1006
>07_01_1069 -
9493001-9493176,9493269-9493300,9493405-9493499,
9493623-9493898,9493976-9494039,9498048-9498113,
9498283-9498413,9499722-9499859,9499964-9500079,
9500166-9500331,9500435-9500548,9500609-9500692,
9500995-9501073,9501134-9501337,9501999-9502096,
9502187-9502284,9502359-9502495,9502606-9502824,
9503541-9503743,9503856-9504005
Length = 881
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 RPTRYHAVCND-GRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLA 149
RPT YH + ++ G +P+ + Q L L ++Y R A+S P YAHLA
Sbjct: 785 RPTHYHVLLDEIGFLPD-DVQKLVLSLSYVYQRSTTAISVVAPICYAHLA 833
>04_04_0049 - 22356139-22357649,22357764-22357995
Length = 580
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 609 EVSLLSFTDLACETPNSLKGFLDRGCHGKNPNILYLDIRR 728
E+ LLSF+D+A + S G++ G G P +L + +R+
Sbjct: 487 EMMLLSFSDVALTSAASTFGYVSHGLAGLRPWVLMVPVRK 526
>08_01_0054 - 367770-370166
Length = 798
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = -1
Query: 495 YVLYFH*KNLDFTQKAI*FLS*NNHIYRVRDVFIIFIAKGMVIDINIIRLRMKSFVVIRV 316
Y++ FH +N F L H +D+F +A+G+V ++ L MKS + +
Sbjct: 650 YLIDFHLENRTFNIMIDALLKGGRHD-EAKDLFASLLARGLVPNVVTYWLMMKSLIEQGL 708
Query: 315 LLNSDYIYIFKISSC*TKNIRSVSA 241
L D +++ + T N R ++A
Sbjct: 709 LEELDDLFLSLEKNGCTANSRMLNA 733
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,345,964
Number of Sequences: 37544
Number of extensions: 361154
Number of successful extensions: 717
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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