Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30854
         (828 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          25   2.2  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   2.8  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    24   5.0  
DQ080906-1|AAY89552.1|  120|Anopheles gambiae olfactory receptor...    23   8.7  
DQ080904-1|AAY89550.1|  120|Anopheles gambiae olfactory receptor...    23   8.7  

>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 730 SLRMSRYNILGFLP*QPRSKKPLRLFG 650
           S+R +   +LGF P +  SK+  RLFG
Sbjct: 146 SIRQNIQKMLGFAPSRAASKQGRRLFG 172


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = -2

Query: 791 III*SHSNWSDETNFKSGVLIPPNVEIQYI 702
           I++ ++++ + E  +KS VLI PN E+ ++
Sbjct: 113 IVLFNNADGNYEVRYKSNVLIYPNGEVLWV 142


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = +1

Query: 379 FCNENYKHVSYPINMIVS*QKLDSFLCKIKIFL 477
           FC ++YK+ ++P N+ ++ +K D+   KI+  L
Sbjct: 806 FCFDDYKNQTFPFNLDIN-KKADNGSKKIEFRL 837


>DQ080906-1|AAY89552.1|  120|Anopheles gambiae olfactory receptor 38
           protein.
          Length = 120

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +1

Query: 637 WHVRLQIASRAF*IAVVMVKTLIYCISTF 723
           W+V+++IA     +A+ +V    YC+  +
Sbjct: 44  WYVKVRIAVNLITLAICIVGEFRYCLYAY 72


>DQ080904-1|AAY89550.1|  120|Anopheles gambiae olfactory receptor 38
           protein.
          Length = 120

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +1

Query: 637 WHVRLQIASRAF*IAVVMVKTLIYCISTF 723
           W+V+++IA     +A+ +V    YC+  +
Sbjct: 44  WYVKVRIAVNLITLAICIVGEFRYCLYAY 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,057
Number of Sequences: 2352
Number of extensions: 14036
Number of successful extensions: 70
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)