BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30854 (828 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 25 0.65 DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 25 0.65 DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 25 0.65 DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 25 0.65 DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 25 0.65 DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 25 0.65 DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 2.0 DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 2.6 DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 2.6 DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 2.6 DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 2.6 DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 2.6 DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 23 3.4 >DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 25.4 bits (53), Expect = 0.65 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 349 SYYININNHAFCNENYKHVSY 411 S Y N NN+ + N NYK + Y Sbjct: 92 SNYNNYNNNNYNNNNYKKLQY 112 >DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 25.4 bits (53), Expect = 0.65 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 349 SYYININNHAFCNENYKHVSY 411 S Y N NN+ + N NYK + Y Sbjct: 92 SNYNNYNNNNYNNNNYKKLQY 112 >DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 25.4 bits (53), Expect = 0.65 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 349 SYYININNHAFCNENYKHVSY 411 S Y N NN+ + N NYK + Y Sbjct: 92 SNYNNYNNNNYNNNNYKKLQY 112 >DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 25.4 bits (53), Expect = 0.65 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 349 SYYININNHAFCNENYKHVSY 411 S Y N NN+ + N NYK + Y Sbjct: 92 SNYNNYNNNNYNNNNYKKLQY 112 >DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 25.4 bits (53), Expect = 0.65 Identities = 10/32 (31%), Positives = 18/32 (56%) Frame = +1 Query: 316 NTYNNE*LHS*SYYININNHAFCNENYKHVSY 411 ++ +N +H+ +Y N NN+ + N NY Y Sbjct: 82 SSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLY 113 >DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 25.4 bits (53), Expect = 0.65 Identities = 10/32 (31%), Positives = 18/32 (56%) Frame = +1 Query: 316 NTYNNE*LHS*SYYININNHAFCNENYKHVSY 411 ++ +N +H+ +Y N NN+ + N NY Y Sbjct: 82 SSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLY 113 >DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine receptor beta1subunit protein. Length = 520 Score = 23.8 bits (49), Expect = 2.0 Identities = 9/30 (30%), Positives = 21/30 (70%) Frame = -2 Query: 791 III*SHSNWSDETNFKSGVLIPPNVEIQYI 702 I++ ++++ + E +KS VLI PN ++ ++ Sbjct: 113 IVLFNNADGNYEVRYKSNVLIYPNGDVLWV 142 >DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 23.4 bits (48), Expect = 2.6 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +1 Query: 361 NINNHAFCNENYKHVSYPINMI 426 N N + N NYK + Y IN I Sbjct: 88 NYNYSNYNNNNYKQLCYNINYI 109 >DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 23.4 bits (48), Expect = 2.6 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +1 Query: 361 NINNHAFCNENYKHVSYPINMI 426 N N + N NYK + Y IN I Sbjct: 88 NYNYSNYNNNNYKQLCYNINYI 109 >DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 23.4 bits (48), Expect = 2.6 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +1 Query: 361 NINNHAFCNENYKHVSYPINMI 426 N N + N NYK + Y IN I Sbjct: 88 NYNYSNYNNNNYKQLCYNINYI 109 >DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 23.4 bits (48), Expect = 2.6 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +1 Query: 361 NINNHAFCNENYKHVSYPINMI 426 N N + N NYK + Y IN I Sbjct: 88 NYNYSNYNNNNYKQLCYNINYI 109 >DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 23.4 bits (48), Expect = 2.6 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +1 Query: 361 NINNHAFCNENYKHVSYPINMI 426 N N + N NYK + Y IN I Sbjct: 88 NYNYSNYNNNNYKQLCYNINYI 109 >DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 23.0 bits (47), Expect = 3.4 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +1 Query: 361 NINNHAFCNENYKHVSYPINMI 426 N N + N NYK + Y IN I Sbjct: 88 NYNYSNYNNNNYKQLCYNINHI 109 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 213,025 Number of Sequences: 438 Number of extensions: 4398 Number of successful extensions: 18 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 18 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 26460186 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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