Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30854
(828 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g43810.1 68418.m05357 pinhead protein (PINHEAD) / zwille prot... 61 1e-09
At1g69440.1 68414.m07979 PAZ domain-containing protein / piwi do... 57 1e-08
At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to S... 56 3e-08
At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to S... 56 3e-08
At2g27880.1 68415.m03380 argonaute protein, putative / AGO, puta... 56 4e-08
At1g31280.1 68414.m03828 PAZ domain-containing protein / piwi do... 43 2e-04
At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi do... 41 0.001
At2g27040.1 68415.m03249 PAZ domain-containing protein / piwi do... 40 0.002
At5g21150.1 68418.m02526 PAZ domain-containing protein / piwi do... 40 0.003
At5g21030.1 68418.m02501 PAZ domain-containing protein / piwi do... 39 0.004
At2g32940.1 68415.m04038 PAZ domain-containing protein / piwi do... 35 0.076
At1g14110.1 68414.m01668 xyloglucan fucosyltransferase family pr... 28 6.6
>At5g43810.1 68418.m05357 pinhead protein (PINHEAD) / zwille protein
(ZWILLE) identical to SP|Q9XGW1 PINHEAD protein (ZWILLE
protein) {Arabidopsis thaliana}; contains Pfam profiles
PF02171: Piwi domain, PF02170: PAZ domain
Length = 988
Score = 60.9 bits (141), Expect = 1e-09
Identities = 34/84 (40%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRARSLTYGE 182
RP YH + ++ + Q L LC+ YARC R+VS P YYAHLA RAR E
Sbjct: 889 RPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYLEPE 948
Query: 183 IFNNNDL--EKNPKRLRVLDSMLK 248
I +N +KN K V D +K
Sbjct: 949 IMQDNGSPGKKNTKTTTVGDVGVK 972
>At1g69440.1 68414.m07979 PAZ domain-containing protein / piwi
domain-containing protein similar to SP|Q9XGW1 PINHEAD
protein (ZWILLE protein) {Arabidopsis thaliana}; contains
Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain
Length = 990
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/54 (42%), Positives = 31/54 (57%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RPT YH + ++ +E Q L Y LC+ + RC + +S P YYAHLA R R
Sbjct: 893 RPTHYHILWDENEFTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAAYRGR 946
>At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1050
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RP YH + ++ + Q L LC+ YARC R+VS P YYAHLA RAR
Sbjct: 942 RPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRAR 995
>At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1048
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RP YH + ++ + Q L LC+ YARC R+VS P YYAHLA RAR
Sbjct: 940 RPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRAR 993
>At2g27880.1 68415.m03380 argonaute protein, putative / AGO, putative
similar to SP|O04379 Argonaute protein (AGO1)
{Arabidopsis thaliana}; contains Pfam profiles PF02170:
PAZ domain, PF02171: Piwi domain
Length = 997
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRAR 164
RP YH + ++ ++ Q L LC+ YARC ++VS P YYAHLA RAR
Sbjct: 901 RPAHYHVLLDENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRAR 954
>At1g31280.1 68414.m03828 PAZ domain-containing protein / piwi
domain-containing protein similar to SP|O04379 Argonaute
protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD
protein (ZWILLE protein) {Arabidopsis thaliana}; contains
Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain
Length = 1013
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRARSLTYGE 182
+PT Y+ + ++ ++ Q L + +C + RC + VS P YYA + R R Y E
Sbjct: 907 KPTHYYTLWDELGFTSDQVQKLIFEMCFTFTRCTKPVSLVPPVYYADMVAFRGR--MYHE 964
Query: 183 IFNNNDLEKNPKRLRVLDSMLKQSVCSSS--NKMIF 284
+ K P+ + L S+ S + +K IF
Sbjct: 965 ASSREKNFKQPRGASTSAASLASSLSSLTIEDKAIF 1000
>At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi
domain-containing protein contains Pfam profiles PF02170:
PAZ domain, PF02171: Piwi domain
Length = 1194
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/92 (30%), Positives = 45/92 (48%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRARSLTYGE 182
+PT Y+ + ++ N+ Q L + LC + RC + V+ P YA A R R Y
Sbjct: 1088 KPTHYYVLSDEIGFNSNQIQKLIFDLCFTFTRCTKPVALVPPVSYADKAASRGR--VY-- 1143
Query: 183 IFNNNDLEKNPKRLRVLDSMLKQSVCSSSNKM 278
+ + ++KN K+ R S SV SSS+ +
Sbjct: 1144 -YEASLMKKNSKQSRGASSS-SASVASSSSSV 1173
>At2g27040.1 68415.m03249 PAZ domain-containing protein / piwi
domain-containing protein similar to SP|Q9QZ81
Eukaryotic translation initiation factor 2C 2 {Rattus
norvegicus}; contains Pfam profiles PF02171: Piwi
domain, PF02170: PAZ domain
Length = 924
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLA 149
RPT YH + ++ +E Q L + L ++Y R A+S P YAHLA
Sbjct: 828 RPTHYHVLYDEIGFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLA 876
>At5g21150.1 68418.m02526 PAZ domain-containing protein / piwi
domain-containing protein similar to SP|O04379 Argonaute
protein (AGO1) {Arabidopsis thaliana}; contains Pfam
profile: PF02170 PAZ (Piwi Argonaut and Zwille), PF02171
Piwi domain
Length = 896
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLA 149
RPT YH + ++ ++ Q L + L ++Y R A+S P YAHLA
Sbjct: 800 RPTHYHVLYDEIGFATDDLQELVHSLSYVYQRSTTAISVVAPVCYAHLA 848
>At5g21030.1 68418.m02501 PAZ domain-containing protein / piwi
domain-containing protein similar to SP|O04379 Argonaute
protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD
protein (ZWILLE protein) {Arabidopsis thaliana};
contains Pfam profiles PF02171: Piwi domain, PF02170:
PAZ domain
Length = 850
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLA 149
RPT YH + ++ ++ Q L + L ++Y R A+S P YAHLA
Sbjct: 754 RPTHYHVLYDEIGFDTDQLQELVHSLSYVYQRSTTAISLVAPICYAHLA 802
>At2g32940.1 68415.m04038 PAZ domain-containing protein / piwi
domain-containing protein similar to SP|O04379 Argonaute
protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD
protein (ZWILLE protein) {Arabidopsis thaliana};
contains Pfam profiles PF02171: Piwi domain, PF02170:
PAZ domain
Length = 878
Score = 34.7 bits (76), Expect = 0.076
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 3 RPTRYHAVCNDGRIPENEGQHLAYYLCHLYARCMRAVSYPTPTYYAHLACLRARSLT 173
RP YH + ++ ++ Q+L + L ++ R A S P YAHLA + T
Sbjct: 794 RPAHYHVLLDEIGFSPDDLQNLIHSLSYVNQRSTTATSIVAPVRYAHLAAAQVAQFT 850
>At1g14110.1 68414.m01668 xyloglucan fucosyltransferase family
protein contains Pfam profile: PF03254 xyloglucan
fucosyltransferase
Length = 907
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 609 EVSLLSFTDLACETPNSLKGFLDRGCHGKNPNILY 713
E+ LLS TD + +S G++ +G G P ILY
Sbjct: 425 EIYLLSLTDYIVTSDSSTFGYVAQGLGGLKPWILY 459
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,144,555
Number of Sequences: 28952
Number of extensions: 311231
Number of successful extensions: 564
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1902108000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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