Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30853
         (835 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   1.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.1  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   8.0  

>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 402 PRFPMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFE 512
           P F ML QN+L    + + L  +  + + ++P +KFE
Sbjct: 418 PAFYMLYQNILSYFLRYKKLQPQYSQSELQMPGVKFE 454


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 402 PRFPMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFE 512
           P F ML Q +L    + + L  +  + + ++P +KFE
Sbjct: 418 PAFYMLYQKILSYFLRYKKLQPQYSQSELQMPGVKFE 454


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -1

Query: 463  LSSWFFHFNISRFC 422
            +S+W +H N+++ C
Sbjct: 1674 MSTWGYHHNVNKHC 1687


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +3

Query: 219 PTEVAAATEEKKPNLLQLVTTR----YPLYQRPKRTI*PQKT 332
           P  V+ ++  ++P   ++  T+    +P Y+RP+ T  P+ T
Sbjct: 130 PPSVSLSSPPREPGTPRINFTKLKRHHPRYKRPRTTFEPRAT 171


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 827 WFLAVANFGCLTGMPSFS 774
           W L V  F  LTG P F+
Sbjct: 549 WSLGVLMFELLTGTPPFT 566


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,720
Number of Sequences: 438
Number of extensions: 3735
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)