Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30852
(759 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 255 3e-68
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 255 3e-68
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 254 6e-68
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 254 6e-68
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 236 1e-62
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 236 1e-62
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 225 3e-59
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 104 6e-23
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 104 6e-23
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 103 1e-22
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 103 1e-22
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 103 1e-22
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 103 2e-22
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 99 2e-21
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 99 2e-21
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 98 6e-21
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 73 3e-13
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 73 3e-13
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 1.9
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.5
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.4
At3g60850.1 68416.m06807 expressed protein 28 5.9
At2g14260.2 68415.m01594 proline iminopeptidase identical to GP:... 28 5.9
At2g14260.1 68415.m01595 proline iminopeptidase identical to GP:... 28 5.9
At3g23120.1 68416.m02914 leucine-rich repeat family protein cont... 28 7.7
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 255 bits (624), Expect = 3e-68
Identities = 118/170 (69%), Positives = 134/170 (78%)
Frame = +2
Query: 2 CISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 181
CIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVP
Sbjct: 4 CISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVP 63
Query: 182 RACLRRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 361
RA + + +PEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIR
Sbjct: 64 RAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIR 123
Query: 362 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
KLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP
Sbjct: 124 KLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYP 173
Score = 88.6 bits (210), Expect = 4e-18
Identities = 46/79 (58%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPN-LQPN*IVS 684
P+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L IERP N +VS
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVS 232
Query: 685 SDRLSPSINWLSLRFERAL 741
++ S+ SLRF+ AL
Sbjct: 233 --QVISSLT-ASLRFDGAL 248
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 255 bits (624), Expect = 3e-68
Identities = 118/170 (69%), Positives = 134/170 (78%)
Frame = +2
Query: 2 CISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 181
CIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVP
Sbjct: 4 CISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVP 63
Query: 182 RACLRRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 361
RA + + +PEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIR
Sbjct: 64 RAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIR 123
Query: 362 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
KLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP
Sbjct: 124 KLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYP 173
Score = 88.6 bits (210), Expect = 4e-18
Identities = 46/79 (58%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPN-LQPN*IVS 684
P+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L IERP N +VS
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVS 232
Query: 685 SDRLSPSINWLSLRFERAL 741
++ S+ SLRF+ AL
Sbjct: 233 --QVISSLT-ASLRFDGAL 248
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 254 bits (621), Expect = 6e-68
Identities = 118/170 (69%), Positives = 133/170 (78%)
Frame = +2
Query: 2 CISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 181
CIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVP
Sbjct: 4 CISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVP 63
Query: 182 RACLRRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 361
RA + + +PEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIR
Sbjct: 64 RAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIR 123
Query: 362 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
KLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP
Sbjct: 124 KLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYP 173
Score = 89.0 bits (211), Expect = 3e-18
Identities = 46/79 (58%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPN-LQPN*IVS 684
P+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+IERP N +VS
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVS 232
Query: 685 SDRLSPSINWLSLRFERAL 741
++ S+ SLRF+ AL
Sbjct: 233 --QVISSLT-ASLRFDGAL 248
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 254 bits (621), Expect = 6e-68
Identities = 118/170 (69%), Positives = 133/170 (78%)
Frame = +2
Query: 2 CISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 181
CIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVP
Sbjct: 4 CISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVP 63
Query: 182 RACLRRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIR 361
RA + + +PEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIR
Sbjct: 64 RAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIR 123
Query: 362 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
KLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP
Sbjct: 124 KLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYP 173
Score = 89.0 bits (211), Expect = 3e-18
Identities = 46/79 (58%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPN-LQPN*IVS 684
P+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+IERP N +VS
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVS 232
Query: 685 SDRLSPSINWLSLRFERAL 741
++ S+ SLRF+ AL
Sbjct: 233 --QVISSLT-ASLRFDGAL 248
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 236 bits (578), Expect = 1e-62
Identities = 110/169 (65%), Positives = 128/169 (75%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 184
IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPR
Sbjct: 5 ISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPR 64
Query: 185 ACLRRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 364
A + + +PEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 365 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
LAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYP 173
Score = 92.3 bits (219), Expect = 3e-19
Identities = 47/79 (59%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPN-LQPN*IVS 684
P+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP N ++S
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLIS 232
Query: 685 SDRLSPSINWLSLRFERAL 741
++ S+ SLRF+ A+
Sbjct: 233 --QIISSLT-TSLRFDGAI 248
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 236 bits (578), Expect = 1e-62
Identities = 110/169 (65%), Positives = 128/169 (75%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 184
IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPR
Sbjct: 5 ISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPR 64
Query: 185 ACLRRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 364
A + + +PEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 365 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
LAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYP 173
Score = 92.3 bits (219), Expect = 3e-19
Identities = 47/79 (59%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPN-LQPN*IVS 684
P+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP N ++S
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLIS 232
Query: 685 SDRLSPSINWLSLRFERAL 741
++ S+ SLRF+ A+
Sbjct: 233 --QIISSLT-TSLRFDGAI 248
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 225 bits (549), Expect = 3e-59
Identities = 103/169 (60%), Positives = 126/169 (74%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 184
IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+HVPR
Sbjct: 5 ISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPR 64
Query: 185 ACLRRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 364
A + + +PEQLI+GKEDAANN+ARGHYT+G+EIVD L+R+RK
Sbjct: 65 AVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRK 124
Query: 365 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
LAD CTGLQGFL+F+ LL+ERLSVD+GKKSKL F IYP
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYP 173
Score = 91.1 bits (216), Expect = 7e-19
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPNLQPN*IVSS 687
P+PQVSTAVVEPYNS+L+TH+ LEH+D ++DNEAIYDICRR+LDIERP + S
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLIS 232
Query: 688 DRLSPSINWLSLRFERAL 741
+S S+ SLRF+ A+
Sbjct: 233 QTIS-SLT-TSLRFDGAI 248
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 104 bits (250), Expect = 6e-23
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 6/175 (3%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETGAGKH 175
+ + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E G++
Sbjct: 5 LHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEASCGRY 59
Query: 176 VPRACL---RRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLV 346
VPRA L GP+ I P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 60 VPRAILMDLEPGTMDSVRTGPYGQI---FRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 116
Query: 347 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
LD +RK A+ C LQGF + H LL+ ++ +Y + L F+++P
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 171
Score = 60.9 bits (141), Expect = 9e-10
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPN 660
P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P+
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 104 bits (250), Expect = 6e-23
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 184
+ V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G++VPR
Sbjct: 5 LHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGRYVPR 63
Query: 185 ACL---RRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 355
A L GP+ I P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 64 AVLMDLEPGTMDSIRSGPYGQI---FRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 356 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 172
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPN 660
P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P+
Sbjct: 172 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPS 222
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 103 bits (248), Expect = 1e-22
Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 184
+ + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+ VPR
Sbjct: 5 LHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPR 62
Query: 185 ACL---RRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 355
A L GP+ QT P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 63 AVLMDLEPGTMDSLRSGPYG--QTF-RPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 356 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 171
Score = 60.9 bits (141), Expect = 9e-10
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPN 660
P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P+
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 103 bits (248), Expect = 1e-22
Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 184
+ + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+ VPR
Sbjct: 5 LHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPR 62
Query: 185 ACL---RRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 355
A L GP+ QT P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 63 AVLMDLEPGTMDSLRSGPYG--QTF-RPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 356 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 171
Score = 60.9 bits (141), Expect = 9e-10
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPN 660
P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P+
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 103 bits (247), Expect = 1e-22
Identities = 56/169 (33%), Positives = 84/169 (49%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 184
+ + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK+VPR
Sbjct: 5 LHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGKYVPR 62
Query: 185 ACLRRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 364
A L + P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 365 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
A+ C LQGF + H LL+ ++ +Y + + F+++P
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFP 171
Score = 60.9 bits (141), Expect = 9e-10
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 657
P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANP 220
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 103 bits (246), Expect = 2e-22
Identities = 55/169 (32%), Positives = 85/169 (50%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 184
+ + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G++VPR
Sbjct: 5 LHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGRYVPR 63
Query: 185 ACLRRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 364
A L + P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 64 AVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 123
Query: 365 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
A+ C LQGF + H LL+ ++ +Y + L F+++P
Sbjct: 124 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 172
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPN 660
P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P+
Sbjct: 172 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPS 222
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 99 bits (238), Expect = 2e-21
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 184
+ + GQ G QIG WE+ C EHGI G+ + + + N +++E G+ VPR
Sbjct: 5 LHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGRFVPR 62
Query: 185 ACL---RRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 355
A L GP+ I P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQI---FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 356 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 171
Score = 60.9 bits (141), Expect = 9e-10
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPN 660
P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P+
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPS 221
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 99 bits (238), Expect = 2e-21
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 184
+ + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G++VPR
Sbjct: 5 LHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGRYVPR 62
Query: 185 ACL---RRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 355
A L GP+ I P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQI---FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 356 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
+RK A+ C LQGF + H LL+ ++ +Y + + F+++P
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFP 171
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPN 660
P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P+
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPS 221
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 97.9 bits (233), Expect = 6e-21
Identities = 54/169 (31%), Positives = 83/169 (49%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 184
+ + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK+VPR
Sbjct: 5 LHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGKYVPR 62
Query: 185 ACLRRS*TYCC**GPHWHIQTVVYPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 364
A L + P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 365 LADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
A+ LQGF + H LL+ ++ +Y + + F+++P
Sbjct: 123 EAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFP 171
Score = 60.9 bits (141), Expect = 9e-10
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +1
Query: 508 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP 657
P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANP 220
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 72.5 bits (170), Expect = 3e-13
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 2/171 (1%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 184
I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + ++PR
Sbjct: 6 ITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPR 63
Query: 185 ACLRRS*TYCC**GPHWHIQTVVYPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRI 358
A L + + + E + A NN+A G++ GK + + ++D I
Sbjct: 64 ALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMI 122
Query: 359 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
+ AD L+GF++ H L+E L+ Y KK ++++P
Sbjct: 123 DREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFP 173
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPNL-QPN*IVSS 687
+ S VV+PYNS+LT ++DC ++DN A+ I L + P Q N +VS+
Sbjct: 177 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVST 234
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 180 PVHVFVDLEPTVVDEVRTGTYRQLFIQNNLLL 275
P + +DLEP V++ ++ G YR L+ N+ L
Sbjct: 62 PRALLIDLEPRVINGIQNGEYRNLYNHENIFL 93
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 72.5 bits (170), Expect = 3e-13
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 2/171 (1%)
Frame = +2
Query: 5 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 184
I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + ++PR
Sbjct: 6 ITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPR 63
Query: 185 ACLRRS*TYCC**GPHWHIQTVVYPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRI 358
A L + + + E + A NN+A G++ GK + + ++D I
Sbjct: 64 ALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMI 122
Query: 359 RKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 511
+ AD L+GF++ H L+E L+ Y KK ++++P
Sbjct: 123 DREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFP 173
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPNL-QPN*IVSS 687
+ S VV+PYNS+LT ++DC ++DN A+ I L + P Q N +VS+
Sbjct: 177 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVST 234
Score = 31.1 bits (67), Expect = 0.83
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 180 PVHVFVDLEPTVVDEVRTGTYRQLFIQNNLLL 275
P + +DLEP V++ ++ G YR L+ N+ +
Sbjct: 62 PRALLIDLEPRVINGIQNGDYRNLYNHENIFV 93
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -1
Query: 648 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 514
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 430 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 332
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 162 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 37
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At3g60850.1 68416.m06807 expressed protein
Length = 648
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 754 VPHSEAPVRISKKAS*SKETICPMRRFSLVVGWAAQCRDYGGRCHR 617
VP E P R+ + A+ K +C +++ + A+ +DY CHR
Sbjct: 274 VPAKEVPDRLQQLAAKHKVVLCIRQKYIRYKPFMAEVKDYA--CHR 317
>At2g14260.2 68415.m01594 proline iminopeptidase identical to
GP:1710151:U72711
Length = 329
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 74 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRACLRRS*TY 211
HG G P+++ + F + GAGK P ACL + T+
Sbjct: 52 HGGPGGGTAPSNRRFFDPEFYRIVLFDQRGAGKSTPHACLEENTTW 97
>At2g14260.1 68415.m01595 proline iminopeptidase identical to
GP:1710151:U72711
Length = 380
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 74 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRACLRRS*TY 211
HG G P+++ + F + GAGK P ACL + T+
Sbjct: 103 HGGPGGGTAPSNRRFFDPEFYRIVLFDQRGAGKSTPHACLEENTTW 148
>At3g23120.1 68416.m02914 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-5b GB:AAC78595
[Lycopersicon esculentum] (Plant Cell 10, 1915-1926
(1998);
Length = 784
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 586 DCAFMVDNEAIY---DICRRNLDIERPNLQPN*IVSSDRLSPSINWLS 720
+C+ V N +Y +ICR + + P Q + SS+ P +NW++
Sbjct: 707 NCSSFVGNPGLYGLDEICRESHHVPVPTSQQHDGSSSELEEPVLNWIA 754
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,287,790
Number of Sequences: 28952
Number of extensions: 369874
Number of successful extensions: 1091
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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