Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30850
         (861 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1DRW4 Cluster: Predicted protein; n=2; Coccidioides im...    34   4.0  
UniRef50_Q5FKN7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_Q8I3L2 Cluster: Putative uncharacterized protein PFE126...    33   7.0  
UniRef50_A0C248 Cluster: Chromosome undetermined scaffold_143, w...    33   7.0  
UniRef50_Q14PD2 Cluster: Hypothetical transmembrane protein; n=1...    33   9.3  
UniRef50_Q11PV1 Cluster: Putative uncharacterized protein; n=1; ...    33   9.3  
UniRef50_Q1DH78 Cluster: Putative uncharacterized protein; n=1; ...    33   9.3  

>UniRef50_Q1DRW4 Cluster: Predicted protein; n=2; Coccidioides
           immitis|Rep: Predicted protein - Coccidioides immitis
          Length = 218

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +1

Query: 217 WNQITHYMFRHRFLHLVSCVLDIAFHLLTVAIVTDGFQCDVNYDKFSAIPWAVVEPLLLV 396
           W  ITH  F+  F       LD+  H + +  + D      N D+  AI W+ VE L  +
Sbjct: 87  WQHITHANFKANFHDAQKITLDVKQHCIDMQKIKDRLVATWNIDRIDAI-WSKVESLERI 145

Query: 397 LNLGTH 414
             +  H
Sbjct: 146 AAMLVH 151


>UniRef50_Q5FKN7 Cluster: Putative uncharacterized protein; n=1;
           Lactobacillus acidophilus|Rep: Putative uncharacterized
           protein - Lactobacillus acidophilus
          Length = 168

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 471 HIDYRRAQMLSRYLHVYLVDILNFLINLIWLRIVVSYLGAL 593
           H D  +    SRYL +  +  + F INL+WL + VSY   L
Sbjct: 18  HKDSIKYMYFSRYLMIRYIVTIFFFINLMWLIVSVSYASVL 58


>UniRef50_Q8I3L2 Cluster: Putative uncharacterized protein PFE1260c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFE1260c - Plasmodium falciparum
           (isolate 3D7)
          Length = 481

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -3

Query: 298 VNETLYPRHKTPNAESD-DETYSA*FDSTAHVSDV*NHCENVSN*KNCTQFTTHTHN 131
           +NE  YP   +PN E++ D T S   ++  + ++  N+  N++N  NC     H+ N
Sbjct: 128 INENTYPSQLSPNMENNYDMTISLNMNNNNNNNNNNNNINNMNNNINCNNNNNHSEN 184


>UniRef50_A0C248 Cluster: Chromosome undetermined scaffold_143,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_143,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 672

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +3

Query: 576 SYLGALYKRNPEPMR-MFLSLSIVKGRDANHLFRITNRILRYF 701
           SY+GA+Y RN + +   + SL+I + +D +    + N I +YF
Sbjct: 134 SYIGAIYMRNLDQLNDYYTSLAIFRKKDDDQHILVPNNIFKYF 176


>UniRef50_Q14PD2 Cluster: Hypothetical transmembrane protein; n=1;
           Spiroplasma citri|Rep: Hypothetical transmembrane
           protein - Spiroplasma citri
          Length = 252

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = +2

Query: 92  VLRFVYTINNKTIIVGVCGELRAVLSIGNVLTMVLHVTNMCCGIKLRTICF----VIAFC 259
           + + + T+N  TIIV + G +     +G  +   ++V N   G+ + T       +IAFC
Sbjct: 160 ITKTLKTVNIWTIIVSIVGNINCFSVLGLAILQFVYVKNSVAGLNINTFILPSFAIIAFC 219

Query: 260 IWCL 271
            + L
Sbjct: 220 CFIL 223


>UniRef50_Q11PV1 Cluster: Putative uncharacterized protein; n=1;
           Cytophaga hutchinsonii ATCC 33406|Rep: Putative
           uncharacterized protein - Cytophaga hutchinsonii (strain
           ATCC 33406 / NCIMB 9469)
          Length = 133

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -2

Query: 80  TSQIIYFRKFLTGSLRCSTPPH 15
           TSQI Y  + LTGS+ C+ PPH
Sbjct: 97  TSQISYASEILTGSVTCNAPPH 118


>UniRef50_Q1DH78 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 180

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +1

Query: 217 WNQITHYMFRHRFLHLVSCVLDIAFHLLTVAIVTDGFQCDVNYDKFSAIPWAVVEPLLLV 396
           W  ITH  F+  F       LD+  H + +  + +      + D+  AI W+ VE LLL 
Sbjct: 88  WQHITHTNFKADFHDAQKVTLDVKQHCIDMQKIKNRLVATWSIDRIDAI-WSKVESLLLQ 146

Query: 397 L 399
           L
Sbjct: 147 L 147


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 957,760,623
Number of Sequences: 1657284
Number of extensions: 20820301
Number of successful extensions: 47942
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 45993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47926
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)