Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30850
         (861 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   7.2  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 590 CSQIGHDNPQPNQINEKI-EDVNQVYVEIPG*HLG 489
           C Q+  DNP   +I EK+ +D+ ++  E    HLG
Sbjct: 366 CGQLNPDNPNVYEILEKLYKDLLELSDETELFHLG 400


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 448 QYNMYVEYTSIIAEPRCYPGISTYTWLTSSI 540
           QYN+ + YT I+++   Y GI    +  S +
Sbjct: 234 QYNVILRYTKIVSD--TYQGILVVQFFCSLV 262


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +3

Query: 483 RRAQMLSRYLHVYLVDI----LNFLINLIWLRIVVSYLG 587
           R+++M     H+ L D+    +N L ++IW   V  Y G
Sbjct: 55  RKSRMNYFITHLALADLSVGLINVLTDIIWKTTVAWYAG 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,833
Number of Sequences: 336
Number of extensions: 5772
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)