BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30850 (861 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 24 5.2 AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 23 9.0 AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 23 9.0 >AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. Length = 1356 Score = 24.2 bits (50), Expect = 5.2 Identities = 11/38 (28%), Positives = 22/38 (57%) Frame = -2 Query: 623 HSHRFRISLI*CSQIGHDNPQPNQINEKIEDVNQVYVE 510 H + +++ CS+ G+D+ P+QI D Q+Y++ Sbjct: 766 HDQSWSSNVVDCSRAGYDDRLPDQIP---MDSTQIYLD 800 >AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. Length = 1229 Score = 23.4 bits (48), Expect = 9.0 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 184 ENVSN*KNCTQFTTHTHNNSFIVDCIYK 101 E V N + CT FT ++ S +D IYK Sbjct: 1060 EKVKN-ERCTLFTNCCNHISDAIDAIYK 1086 >AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2 protein. Length = 372 Score = 23.4 bits (48), Expect = 9.0 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +2 Query: 134 VGVCGELRAVLSIGNVLTMVLHVTNMCCGIKLRTIC 241 VG C LR+ LSI NVL ++T + +++ C Sbjct: 39 VGTCVYLRSCLSIRNVLLKKENMTPEDRSLVMKSKC 74 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,009,789 Number of Sequences: 2352 Number of extensions: 22242 Number of successful extensions: 28 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 28 length of database: 563,979 effective HSP length: 64 effective length of database: 413,451 effective search space used: 91786122 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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