Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30850
         (861 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   5.2  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.0  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    23   9.0  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -2

Query: 623 HSHRFRISLI*CSQIGHDNPQPNQINEKIEDVNQVYVE 510
           H   +  +++ CS+ G+D+  P+QI     D  Q+Y++
Sbjct: 766 HDQSWSSNVVDCSRAGYDDRLPDQIP---MDSTQIYLD 800


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 184  ENVSN*KNCTQFTTHTHNNSFIVDCIYK 101
            E V N + CT FT   ++ S  +D IYK
Sbjct: 1060 EKVKN-ERCTLFTNCCNHISDAIDAIYK 1086


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 134 VGVCGELRAVLSIGNVLTMVLHVTNMCCGIKLRTIC 241
           VG C  LR+ LSI NVL    ++T     + +++ C
Sbjct: 39  VGTCVYLRSCLSIRNVLLKKENMTPEDRSLVMKSKC 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,009,789
Number of Sequences: 2352
Number of extensions: 22242
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)