Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30850
         (861 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF323978-1|AAL55993.1|  973|Drosophila melanogaster split centra...    30   4.7  
AF145609-1|AAD38584.1|  974|Drosophila melanogaster BcDNA.GH0283...    29   6.2  
AE014298-2568|AAO41693.1|  975|Drosophila melanogaster CG8611-PB...    29   6.2  
AE014298-2567|AAF48727.2|  974|Drosophila melanogaster CG8611-PA...    29   6.2  

>AF323978-1|AAL55993.1|  973|Drosophila melanogaster split central
           complex protein.
          Length = 973

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 177 TFSQWFYTSLTCAVESNYALYVSSSLSAFGVLCLGYSV 290
           T S W YT LTC    +    +   +SA G+L   +S+
Sbjct: 221 TLSDWSYTGLTCTATDSNGKELQLGVSAVGLLVFQHSL 258


>AF145609-1|AAD38584.1|  974|Drosophila melanogaster BcDNA.GH02833
           protein.
          Length = 974

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 381 AFTSGSKPRNPRLLPIPGDI 440
           A  S  KP+NP  LP PGD+
Sbjct: 166 ALKSNKKPKNPNQLPTPGDL 185


>AE014298-2568|AAO41693.1|  975|Drosophila melanogaster CG8611-PB,
           isoform B protein.
          Length = 975

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 381 AFTSGSKPRNPRLLPIPGDI 440
           A  S  KP+NP  LP PGD+
Sbjct: 167 ALKSNKKPKNPNQLPTPGDL 186


>AE014298-2567|AAF48727.2|  974|Drosophila melanogaster CG8611-PA,
           isoform A protein.
          Length = 974

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 381 AFTSGSKPRNPRLLPIPGDI 440
           A  S  KP+NP  LP PGD+
Sbjct: 166 ALKSNKKPKNPNQLPTPGDL 185


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,295,563
Number of Sequences: 53049
Number of extensions: 978654
Number of successful extensions: 2350
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2350
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)