BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30850 (861 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF323978-1|AAL55993.1| 973|Drosophila melanogaster split centra... 30 4.7 AF145609-1|AAD38584.1| 974|Drosophila melanogaster BcDNA.GH0283... 29 6.2 AE014298-2568|AAO41693.1| 975|Drosophila melanogaster CG8611-PB... 29 6.2 AE014298-2567|AAF48727.2| 974|Drosophila melanogaster CG8611-PA... 29 6.2 >AF323978-1|AAL55993.1| 973|Drosophila melanogaster split central complex protein. Length = 973 Score = 29.9 bits (64), Expect = 4.7 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +3 Query: 177 TFSQWFYTSLTCAVESNYALYVSSSLSAFGVLCLGYSV 290 T S W YT LTC + + +SA G+L +S+ Sbjct: 221 TLSDWSYTGLTCTATDSNGKELQLGVSAVGLLVFQHSL 258 >AF145609-1|AAD38584.1| 974|Drosophila melanogaster BcDNA.GH02833 protein. Length = 974 Score = 29.5 bits (63), Expect = 6.2 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +3 Query: 381 AFTSGSKPRNPRLLPIPGDI 440 A S KP+NP LP PGD+ Sbjct: 166 ALKSNKKPKNPNQLPTPGDL 185 >AE014298-2568|AAO41693.1| 975|Drosophila melanogaster CG8611-PB, isoform B protein. Length = 975 Score = 29.5 bits (63), Expect = 6.2 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +3 Query: 381 AFTSGSKPRNPRLLPIPGDI 440 A S KP+NP LP PGD+ Sbjct: 167 ALKSNKKPKNPNQLPTPGDL 186 >AE014298-2567|AAF48727.2| 974|Drosophila melanogaster CG8611-PA, isoform A protein. Length = 974 Score = 29.5 bits (63), Expect = 6.2 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +3 Query: 381 AFTSGSKPRNPRLLPIPGDI 440 A S KP+NP LP PGD+ Sbjct: 166 ALKSNKKPKNPNQLPTPGDL 185 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 43,295,563 Number of Sequences: 53049 Number of extensions: 978654 Number of successful extensions: 2350 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2204 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2350 length of database: 24,988,368 effective HSP length: 84 effective length of database: 20,532,252 effective search space used: 4147514904 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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