BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30847 (815 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_A0D314 Cluster: Chromosome undetermined scaffold_36, wh... 37 0.53 UniRef50_Q33564 Cluster: CR4 protein; n=1; Trypanosoma brucei|Re... 37 0.70 >UniRef50_A0D314 Cluster: Chromosome undetermined scaffold_36, whole genome shotgun sequence; n=2; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_36, whole genome shotgun sequence - Paramecium tetraurelia Length = 460 Score = 37.1 bits (82), Expect = 0.53 Identities = 21/62 (33%), Positives = 31/62 (50%) Frame = +3 Query: 222 KNKSCNKHFFFNIVWALLLSISQIIITGTNFVFSINNGIYHIKISC*HIFYTQLNTHCRY 401 K K HF ++W L+ + + G N + NNGIYH I C ++F TQ + H + Sbjct: 101 KKKGFGFHFDEQLIWNYLIEM----LVGLNELH--NNGIYHRDIKCANVFLTQDHKHIKL 154 Query: 402 QD 407 D Sbjct: 155 GD 156 >UniRef50_Q33564 Cluster: CR4 protein; n=1; Trypanosoma brucei|Rep: CR4 protein - Trypanosoma brucei Length = 146 Score = 36.7 bits (81), Expect = 0.70 Identities = 17/38 (44%), Positives = 23/38 (60%) Frame = -1 Query: 221 LLIFCFYFY*TVCVRSKVLVLQTCIFHKVVVGITFIMV 108 LL+FCF F VCV L +C+F VV+G F++V Sbjct: 8 LLLFCFLFLLFVCVGMFYLFCYSCLFFFVVLGCDFLLV 45 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 787,937,781 Number of Sequences: 1657284 Number of extensions: 15588595 Number of successful extensions: 33945 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 32494 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 33924 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 70789333940 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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