Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30847
         (815 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2800|AAF48917.3|  380|Drosophila melanogaster CG7440-PA...    31   2.5  
BT021382-1|AAX33530.1| 1449|Drosophila melanogaster LD40485p pro...    29   5.8  
AE013599-2992|AAF57485.1| 1449|Drosophila melanogaster CG16868-P...    29   5.8  

>AE014298-2800|AAF48917.3|  380|Drosophila melanogaster CG7440-PA,
           isoform A protein.
          Length = 380

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -3

Query: 417 PRHCLDICNEY*-AVYKIYANKIFLYDIFHY 328
           PR C+D  +EY  A + +++ ++++YD F+Y
Sbjct: 317 PRSCMDCLSEYPVAFHYVHSKQLYVYDYFNY 347


>BT021382-1|AAX33530.1| 1449|Drosophila melanogaster LD40485p
           protein.
          Length = 1449

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 45  YPCCLISSAASQYRNIVCTQLYHDEGYTHNYFVKYAG 155
           Y  CL+SS     RN+  TQ Y+ +    NY   Y G
Sbjct: 693 YVLCLVSSGGDTLRNVSSTQRYNLKDTVSNYEPGYYG 729


>AE013599-2992|AAF57485.1| 1449|Drosophila melanogaster CG16868-PA
           protein.
          Length = 1449

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 45  YPCCLISSAASQYRNIVCTQLYHDEGYTHNYFVKYAG 155
           Y  CL+SS     RN+  TQ Y+ +    NY   Y G
Sbjct: 693 YVLCLVSSGGDTLRNVSSTQRYNLKDTVSNYEPGYYG 729


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,192,945
Number of Sequences: 53049
Number of extensions: 716664
Number of successful extensions: 1285
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)