Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30846
         (895 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    26   0.35 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.9  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.9  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -1

Query: 664 FSSQRCKEVGTLNFDFVRLVNVDLDFIRYFLFNGVGLRYVY 542
           F S   KE+ +  F   + V   +DF+R F FNG+ + + Y
Sbjct: 601 FGSTPFKELTSNVFRMNQFVYDAIDFLREFQFNGLDVDWEY 641



 Score = 25.8 bits (54), Expect = 0.46
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 584 YEVKVHVDKPYEVKVQSAHFLT 649
           Y+VK+  D PYE  + S  + T
Sbjct: 886 YKVKLEYDGPYETSISSGQYTT 907


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 406 TGTFFTTSTVLMCSW 362
           TG FFT   VLM  W
Sbjct: 426 TGPFFTFCNVLMEMW 440


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 81  FSSLAKATTANDATKITVYFIVVSE 7
           F  ++++T       IT YFIV+ E
Sbjct: 328 FFDISRSTFLGILATITTYFIVIIE 352


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,867
Number of Sequences: 336
Number of extensions: 3450
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)