BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30846 (895 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 26 0.40 DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 24 1.6 DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 24 1.6 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 26.2 bits (55), Expect = 0.40 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -3 Query: 740 FHWKLGPFFSNSVGLGKRALSLHKG 666 FH+ + PF SN L R LS+ KG Sbjct: 1034 FHYSVVPFVSNHDILNLRPLSMEKG 1058 >DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 24.2 bits (50), Expect = 1.6 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -3 Query: 776 MTSYGWGTFNS*FHWKLG 723 M SYGW T + F WK G Sbjct: 178 MASYGWTTDDLVFLWKEG 195 >DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 24.2 bits (50), Expect = 1.6 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -3 Query: 776 MTSYGWGTFNS*FHWKLG 723 M SYGW T + F WK G Sbjct: 178 MASYGWTTDDLVFLWKEG 195 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 209,706 Number of Sequences: 438 Number of extensions: 4137 Number of successful extensions: 13 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 58 effective length of database: 120,939 effective search space used: 28904421 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -