Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30845
         (690 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20868-1|AAA60281.2|  426|Homo sapiens ribosomal protein L4 prot...   103   8e-22
D23660-1|BAA04887.1|  427|Homo sapiens ribosomal protein protein.     103   8e-22
BC095427-1|AAH95427.1|  427|Homo sapiens ribosomal protein L4 pr...   103   8e-22
BC066925-1|AAH66925.1|  427|Homo sapiens ribosomal protein L4 pr...   103   8e-22
BC014653-1|AAH14653.1|  427|Homo sapiens ribosomal protein L4 pr...   103   8e-22
BC010151-1|AAH10151.1|  427|Homo sapiens ribosomal protein L4 pr...   103   8e-22
BC009888-1|AAH09888.1|  427|Homo sapiens ribosomal protein L4 pr...   103   8e-22
BC007996-1|AAH07996.1|  427|Homo sapiens ribosomal protein L4 pr...   103   8e-22
BC007748-1|AAH07748.1|  427|Homo sapiens ribosomal protein L4 pr...   103   8e-22
BC005817-1|AAH05817.1|  427|Homo sapiens ribosomal protein L4 pr...   103   8e-22
BC001365-1|AAH01365.1|  427|Homo sapiens ribosomal protein L4 pr...   103   8e-22
AB208977-1|BAD92214.1|  441|Homo sapiens ribosomal protein L4 va...   103   8e-22
AB061820-1|BAB79458.1|  427|Homo sapiens ribosomal protein L4 pr...   103   8e-22
AK223057-1|BAD96777.1|  427|Homo sapiens ribosomal protein L4 va...    99   1e-20

>L20868-1|AAA60281.2|  426|Homo sapiens ribosomal protein L4
           protein.
          Length = 426

 Score =  103 bits (246), Expect = 8e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IWT+SAF +LD L+G+W+  
Sbjct: 210 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 269

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  KM NTDL+R+LK
Sbjct: 270 ASLKSNYNLPMHKMINTDLSRILK 293



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 296 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 349


>D23660-1|BAA04887.1|  427|Homo sapiens ribosomal protein protein.
          Length = 427

 Score =  103 bits (246), Expect = 8e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IWT+SAF +LD L+G+W+  
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 270

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  KM NTDL+R+LK
Sbjct: 271 ASLKSNYNLPMHKMINTDLSRILK 294



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 297 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350


>BC095427-1|AAH95427.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  103 bits (246), Expect = 8e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IWT+SAF +LD L+G+W+  
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 270

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  KM NTDL+R+LK
Sbjct: 271 ASLKSNYNLPMHKMINTDLSRILK 294



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 297 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350


>BC066925-1|AAH66925.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  103 bits (246), Expect = 8e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IWT+SAF +LD L+G+W+  
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 270

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  KM NTDL+R+LK
Sbjct: 271 ASLKSNYNLPMHKMINTDLSRILK 294



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 297 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350


>BC014653-1|AAH14653.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  103 bits (246), Expect = 8e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IWT+SAF +LD L+G+W+  
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 270

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  KM NTDL+R+LK
Sbjct: 271 ASLKSNYNLPMHKMINTDLSRILK 294



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 297 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350


>BC010151-1|AAH10151.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  103 bits (246), Expect = 8e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IWT+SAF +LD L+G+W+  
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 270

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  KM NTDL+R+LK
Sbjct: 271 ASLKSNYNLPMHKMINTDLSRILK 294



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 297 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350


>BC009888-1|AAH09888.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  103 bits (246), Expect = 8e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IWT+SAF +LD L+G+W+  
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 270

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  KM NTDL+R+LK
Sbjct: 271 ASLKSNYNLPMHKMINTDLSRILK 294



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 297 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350


>BC007996-1|AAH07996.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  103 bits (246), Expect = 8e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IWT+SAF +LD L+G+W+  
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 270

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  KM NTDL+R+LK
Sbjct: 271 ASLKSNYNLPMHKMINTDLSRILK 294



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 297 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350


>BC007748-1|AAH07748.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  103 bits (246), Expect = 8e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IWT+SAF +LD L+G+W+  
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 270

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  KM NTDL+R+LK
Sbjct: 271 ASLKSNYNLPMHKMINTDLSRILK 294



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 297 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350


>BC005817-1|AAH05817.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  103 bits (246), Expect = 8e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IWT+SAF +LD L+G+W+  
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 270

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  KM NTDL+R+LK
Sbjct: 271 ASLKSNYNLPMHKMINTDLSRILK 294



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 297 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350


>BC001365-1|AAH01365.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  103 bits (246), Expect = 8e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IWT+SAF +LD L+G+W+  
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 270

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  KM NTDL+R+LK
Sbjct: 271 ASLKSNYNLPMHKMINTDLSRILK 294



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 297 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350


>AB208977-1|BAD92214.1|  441|Homo sapiens ribosomal protein L4
           variant protein.
          Length = 441

 Score =  103 bits (246), Expect = 8e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IWT+SAF +LD L+G+W+  
Sbjct: 225 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 284

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  KM NTDL+R+LK
Sbjct: 285 ASLKSNYNLPMHKMINTDLSRILK 308



 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 311 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILCQARNHKLR 364


>AB061820-1|BAB79458.1|  427|Homo sapiens ribosomal protein L4
           protein.
          Length = 427

 Score =  103 bits (246), Expect = 8e-22
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IWT+SAF +LD L+G+W+  
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKA 270

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  KM NTDL+R+LK
Sbjct: 271 ASLKSNYNLPMHKMINTDLSRILK 294



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 297 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350


>AK223057-1|BAD96777.1|  427|Homo sapiens ribosomal protein L4
           variant protein.
          Length = 427

 Score = 99.1 bits (236), Expect = 1e-20
 Identities = 41/84 (48%), Positives = 57/84 (67%)
 Frame = +2

Query: 2   FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTP 181
           +N+D G+ +AFRNIPG+             APGGH+GRF IW +SAF +LD L+G+W+  
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDELYGTWRKA 270

Query: 182 SKQKKNFNLPQPKMANTDLTRLLK 253
           +  K N+NLP  +M NTDL+R+LK
Sbjct: 271 ASLKSNYNLPMHEMINTDLSRILK 294



 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = +1

Query: 259 EIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 420
           EI++ LRAP K++ R   K NPL N + MLKLNPYA  ++R  IL   R   L+
Sbjct: 297 EIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,571,071
Number of Sequences: 237096
Number of extensions: 1804970
Number of successful extensions: 3972
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3972
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)