BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30844 (704 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9U9Q4 Cluster: CG9124-PA, isoform A; n=8; Endopterygot... 159 8e-38 UniRef50_O15372 Cluster: Eukaryotic translation initiation facto... 107 2e-22 UniRef50_Q4RFC4 Cluster: Chromosome 8 SCAF15119, whole genome sh... 105 1e-21 UniRef50_Q6P381 Cluster: Eukaryotic translation initiation facto... 103 6e-21 UniRef50_A2QQA2 Cluster: Complex: TIF3H1 in A. thaliana is part ... 86 9e-16 UniRef50_Q4WTA6 Cluster: Eukaryotic translation initiation facto... 82 1e-14 UniRef50_Q9C5Z2 Cluster: Eukaryotic translation initiation facto... 73 9e-12 UniRef50_Q54UD0 Cluster: Putative uncharacterized protein; n=1; ... 71 4e-11 UniRef50_O01974 Cluster: Eukaryotic initiation factor protein 3.... 65 2e-09 UniRef50_Q9UT48 Cluster: Translation initiation factor eIF3h; n=... 64 2e-09 UniRef50_Q5DFV0 Cluster: SJCHGC06090 protein; n=1; Schistosoma j... 61 2e-08 UniRef50_A4S6W8 Cluster: Predicted protein; n=1; Ostreococcus lu... 56 6e-07 UniRef50_Q4UE08 Cluster: Eukaryotic translation initation factor... 52 1e-05 UniRef50_Q00WM8 Cluster: Translation initiation factor 3, subuni... 48 3e-04 UniRef50_Q5CXR9 Cluster: EIF3 gamma/P40 with JAB/PAD domains; tr... 47 4e-04 UniRef50_Q4PI64 Cluster: Putative uncharacterized protein; n=1; ... 47 5e-04 UniRef50_Q086Y6 Cluster: TonB-dependent receptor, plug precursor... 44 0.003 UniRef50_Q6C1I3 Cluster: Similar to wi|NCU07929.1 Neurospora cra... 43 0.006 UniRef50_Q23AY3 Cluster: Mov34/MPN/PAD-1 family protein; n=1; Te... 42 0.011 UniRef50_A3LZL2 Cluster: Predicted protein; n=5; Saccharomycetal... 42 0.020 UniRef50_A0C2G9 Cluster: Chromosome undetermined scaffold_144, w... 41 0.034 UniRef50_A0BC37 Cluster: Chromosome undetermined scaffold_1, who... 41 0.034 UniRef50_Q7R3D6 Cluster: GLP_111_4773_5777; n=2; Giardia intesti... 40 0.060 UniRef50_Q6ZTT3 Cluster: CDNA FLJ44237 fis, clone THYMU3007845; ... 35 1.7 UniRef50_Q1IM63 Cluster: Amino acid transporter; n=1; Acidobacte... 34 3.0 UniRef50_A0DDR5 Cluster: Chromosome undetermined scaffold_47, wh... 34 3.9 UniRef50_UPI00006A22D6 Cluster: YY1-associated protein 1 (Hepato... 33 5.2 UniRef50_A6SB92 Cluster: Predicted protein; n=1; Botryotinia fuc... 33 5.2 UniRef50_P72671 Cluster: Slr0727 protein; n=1; Synechocystis sp.... 33 6.8 UniRef50_Q1ITW3 Cluster: Tryptophan 2,3-dioxygenase; n=9; Bacter... 33 6.8 UniRef50_A3TZZ3 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8 UniRef50_A7RMN7 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.8 UniRef50_Q5KSC5 Cluster: RNA-dependent RNA polymerase; n=1; Hord... 33 9.0 UniRef50_Q9VN50 Cluster: CG9769-PA; n=8; Endopterygota|Rep: CG97... 33 9.0 UniRef50_A4R0I9 Cluster: Predicted protein; n=1; Magnaporthe gri... 33 9.0 UniRef50_O00303 Cluster: Eukaryotic translation initiation facto... 33 9.0 >UniRef50_Q9U9Q4 Cluster: CG9124-PA, isoform A; n=8; Endopterygota|Rep: CG9124-PA, isoform A - Drosophila melanogaster (Fruit fly) Length = 338 Score = 159 bits (385), Expect = 8e-38 Identities = 69/87 (79%), Positives = 81/87 (93%) Frame = +2 Query: 251 KINVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYR 430 ++NVDH HVGWYQS+DVGN LS++LLESQYHYQTSIEESVVV+YDT+KS+RGFL LKAYR Sbjct: 90 RVNVDHLHVGWYQSSDVGNSLSMALLESQYHYQTSIEESVVVVYDTQKSSRGFLCLKAYR 149 Query: 431 LTPQAIAMYKEGDYTPEALRNLKIGYK 511 LTPQAI MYK+GD+TPEA R LK+GY+ Sbjct: 150 LTPQAIQMYKDGDFTPEAFRTLKVGYE 176 Score = 114 bits (274), Expect = 2e-24 Identities = 55/74 (74%), Positives = 63/74 (85%), Gaps = 1/74 (1%) Frame = +3 Query: 9 ARRAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPF 188 A R +++ TI YVQCDGLAVMK+VKHCHEES SNM++AQGALLGLVV+ LEITNCFPF Sbjct: 9 AARTEDSDNTINYVQCDGLAVMKMVKHCHEES-SNMDLAQGALLGLVVDKCLEITNCFPF 67 Query: 189 PKH-DDTMDEEEYQ 227 PK D+TMDEE YQ Sbjct: 68 PKSGDETMDEEMYQ 81 Score = 56.0 bits (129), Expect = 8e-07 Identities = 23/32 (71%), Positives = 30/32 (93%) Frame = +1 Query: 511 NLFIEVPIVIRNSPLTNIMISELTEMIPEEEG 606 NLF E+PIVI+NSPLTNIM+SEL E++PE++G Sbjct: 177 NLFAEIPIVIKNSPLTNIMMSELNELLPEDKG 208 >UniRef50_O15372 Cluster: Eukaryotic translation initiation factor 3 subunit 3; n=41; Euteleostomi|Rep: Eukaryotic translation initiation factor 3 subunit 3 - Homo sapiens (Human) Length = 352 Score = 107 bits (258), Expect = 2e-22 Identities = 47/86 (54%), Positives = 68/86 (79%) Frame = +2 Query: 254 INVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRL 433 +N+DH HVGWYQS G+F++ +LL+SQ+ YQ +IEESVV+IYD K+A+G L+LKAYRL Sbjct: 110 VNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRL 169 Query: 434 TPQAIAMYKEGDYTPEALRNLKIGYK 511 TP+ + + KE D++PEAL+ I ++ Sbjct: 170 TPKLMEVCKEKDFSPEALKKANITFE 195 Score = 81.8 bits (193), Expect = 1e-14 Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 3/69 (4%) Frame = +3 Query: 30 EATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKH---D 200 ++ ++ VQ DGL V+KI+KH EE EV QG LLGLVVE+RLEITNCFPFP+H D Sbjct: 33 DSAVKQVQIDGLVVLKIIKHYQEEG-QGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDD 91 Query: 201 DTMDEEEYQ 227 DE +YQ Sbjct: 92 ADFDEVQYQ 100 >UniRef50_Q4RFC4 Cluster: Chromosome 8 SCAF15119, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 8 SCAF15119, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 315 Score = 105 bits (251), Expect = 1e-21 Identities = 46/78 (58%), Positives = 63/78 (80%) Frame = +2 Query: 254 INVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRL 433 +N+DH HVGWYQS G+F+S +LL+SQ+ YQ +IEESVV+IYD K+A+G L+LKAYRL Sbjct: 100 VNIDHLHVGWYQSTYYGSFVSRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRL 159 Query: 434 TPQAIAMYKEGDYTPEAL 487 TP+ + + KE D+TPE + Sbjct: 160 TPKLMEICKEKDFTPEGV 177 Score = 78.2 bits (184), Expect = 2e-13 Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 3/69 (4%) Frame = +3 Query: 30 EATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKH---D 200 ++ ++ +Q +GL V+KI+KH EE EV QG LLGLVV++RLEITNCFPFP+H D Sbjct: 23 DSPVKQIQIEGLVVLKIIKHYQEEG-QGSEVVQGVLLGLVVDDRLEITNCFPFPQHTEDD 81 Query: 201 DTMDEEEYQ 227 DE +YQ Sbjct: 82 ADFDEVQYQ 90 >UniRef50_Q6P381 Cluster: Eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa; n=8; Eumetazoa|Rep: Eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa - Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) Length = 335 Score = 103 bits (246), Expect = 6e-21 Identities = 45/86 (52%), Positives = 64/86 (74%) Frame = +2 Query: 254 INVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRL 433 +N+DH HVGWYQS G F+S +LL+SQ+ YQ +IEESVV+IYD K+ +G L+LKAYRL Sbjct: 93 VNIDHLHVGWYQSTFYGTFVSRALLDSQFSYQHAIEESVVLIYDPIKTGQGSLSLKAYRL 152 Query: 434 TPQAIAMYKEGDYTPEALRNLKIGYK 511 TP+ + + KE D++ E L+ I ++ Sbjct: 153 TPKLMEVCKEKDFSAEGLKKANIAFE 178 Score = 80.2 bits (189), Expect = 5e-14 Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 1/67 (1%) Frame = +3 Query: 30 EATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKH-DDT 206 E ++ VQ DG+ V+KI+KH EE + EV QG LLGLVV++RLEITNCFPFP+H +D Sbjct: 16 ETAVKQVQIDGMVVLKIIKHYQEEGHGS-EVVQGVLLGLVVDDRLEITNCFPFPQHTEDD 74 Query: 207 MDEEEYQ 227 +D +E Q Sbjct: 75 VDFDEVQ 81 >UniRef50_A2QQA2 Cluster: Complex: TIF3H1 in A. thaliana is part of the heterodecameric eIF3 complex; n=4; Pezizomycotina|Rep: Complex: TIF3H1 in A. thaliana is part of the heterodecameric eIF3 complex - Aspergillus niger Length = 365 Score = 85.8 bits (203), Expect = 9e-16 Identities = 35/88 (39%), Positives = 66/88 (75%), Gaps = 1/88 (1%) Frame = +2 Query: 251 KINVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSI-EESVVVIYDTKKSARGFLTLKAY 427 ++NVD +VGWY SA++GNF++++++E+Q+ YQ + E +V +++D +SA+G L+L+A+ Sbjct: 95 EVNVDANNVGWYTSANMGNFINMNVIENQFFYQKEMNERTVALVHDVSRSAQGSLSLRAF 154 Query: 428 RLTPQAIAMYKEGDYTPEALRNLKIGYK 511 RL+P+ +A +KE +T E L+ + Y+ Sbjct: 155 RLSPKFMAAFKENKFTSEELQKSNLRYQ 182 Score = 45.6 bits (103), Expect = 0.001 Identities = 24/56 (42%), Positives = 34/56 (60%) Frame = +3 Query: 24 ENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFP 191 E E + V+ + L VMKI+KH S + A G+++G+ V+ LEITN FPFP Sbjct: 3 EKEVPLTAVKVEALVVMKIIKH---GSQAFPTTATGSIVGMDVDGTLEITNSFPFP 55 >UniRef50_Q4WTA6 Cluster: Eukaryotic translation initiation factor 3 subunit EifCh, putative; n=12; Pezizomycotina|Rep: Eukaryotic translation initiation factor 3 subunit EifCh, putative - Aspergillus fumigatus (Sartorya fumigata) Length = 365 Score = 81.8 bits (193), Expect = 1e-14 Identities = 33/88 (37%), Positives = 65/88 (73%), Gaps = 1/88 (1%) Frame = +2 Query: 251 KINVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSI-EESVVVIYDTKKSARGFLTLKAY 427 ++NVD +VGWY SA++GNF++++++E+Q+ YQ + E +V +++D +S++G L+L+A+ Sbjct: 95 EVNVDANNVGWYTSANMGNFVNMNVIENQFFYQKEMNERTVALVHDVSRSSQGSLSLRAF 154 Query: 428 RLTPQAIAMYKEGDYTPEALRNLKIGYK 511 RL+P+ + +KE +T E L+ + Y+ Sbjct: 155 RLSPKFMTAFKENKFTSEELQKSGLRYQ 182 Score = 50.0 bits (114), Expect = 6e-05 Identities = 25/56 (44%), Positives = 35/56 (62%) Frame = +3 Query: 24 ENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFP 191 ENE + V+ + L VMKI+KHC + + A G+++G+ V LEITN FPFP Sbjct: 3 ENETPLTAVKVEALVVMKIMKHCSQTFPTT---ATGSIVGMDVGGTLEITNSFPFP 55 >UniRef50_Q9C5Z2 Cluster: Eukaryotic translation initiation factor 3 subunit 3; n=6; Magnoliophyta|Rep: Eukaryotic translation initiation factor 3 subunit 3 - Arabidopsis thaliana (Mouse-ear cress) Length = 337 Score = 72.5 bits (170), Expect = 9e-12 Identities = 32/80 (40%), Positives = 54/80 (67%) Frame = +2 Query: 251 KINVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYR 430 ++NVD+ VGWYQS +G++ ++ L+E+ +YQ +I+ V +IYD K+ G L LKA + Sbjct: 94 EVNVDNNTVGWYQSTVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKADLGVLALKALK 153 Query: 431 LTPQAIAMYKEGDYTPEALR 490 L+ + +Y+ G++T E LR Sbjct: 154 LSDSFMELYRGGNFTGEKLR 173 Score = 62.5 bits (145), Expect = 1e-08 Identities = 33/60 (55%), Positives = 42/60 (70%) Frame = +3 Query: 39 IQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKHDDTMDEE 218 ++ VQ +GLAV+KI+KHC E S + + G LLGL V + LE+TNCFPFP DD DEE Sbjct: 22 LRVVQIEGLAVLKIIKHCKEFSPT---LVTGQLLGLDVGSVLEVTNCFPFPVRDD--DEE 76 >UniRef50_Q54UD0 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 319 Score = 70.5 bits (165), Expect = 4e-11 Identities = 30/87 (34%), Positives = 57/87 (65%), Gaps = 1/87 (1%) Frame = +2 Query: 251 KINVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSI-EESVVVIYDTKKSARGFLTLKAY 427 ++N+D VGWY + +F + S++E+QY+YQ +I ++ VV++YD K+++G L+LK Y Sbjct: 88 EVNIDSNTVGWYTPTYLNSFFNESVIETQYNYQATINQKCVVIVYDPIKTSQGTLSLKCY 147 Query: 428 RLTPQAIAMYKEGDYTPEALRNLKIGY 508 RLT + ++K+ ++ E L + + Sbjct: 148 RLTQSFMELFKDQSFSRERLDQANLSF 174 Score = 55.6 bits (128), Expect = 1e-06 Identities = 27/65 (41%), Positives = 37/65 (56%) Frame = +3 Query: 27 NEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKHDDT 206 + + + VQ DGL V+KI+K C E E+ G LLGL + LE++NCFPFP D Sbjct: 12 SNSKLDVVQIDGLVVLKIIKQCKEYL---PELVPGQLLGLDIGTSLEVSNCFPFPPRDQE 68 Query: 207 MDEEE 221 + E Sbjct: 69 DENSE 73 >UniRef50_O01974 Cluster: Eukaryotic initiation factor protein 3.H; n=2; Caenorhabditis|Rep: Eukaryotic initiation factor protein 3.H - Caenorhabditis elegans Length = 365 Score = 64.9 bits (151), Expect = 2e-09 Identities = 32/86 (37%), Positives = 54/86 (62%) Frame = +2 Query: 254 INVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRL 433 +N+D+ VG+YQS G S L+ES + YQ E+VV+IYD K+ +G L+L+A+RL Sbjct: 103 MNIDYEIVGFYQSHQFGAGFSHDLVESMFDYQAMGPENVVLIYDPIKTRQGQLSLRAWRL 162 Query: 434 TPQAIAMYKEGDYTPEALRNLKIGYK 511 + A+ + + D+ PE ++ + Y+ Sbjct: 163 STAALDLASKNDWRPELVKAAGLTYQ 188 Score = 49.2 bits (112), Expect = 1e-04 Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 7/68 (10%) Frame = +3 Query: 36 TIQYVQCDGLAVMKIVKHCHEESCSNM-----EVAQGALLGLVV--ENRLEITNCFPFPK 194 +++++ D L VMKIVKH E + + + G L GLV ++RLEITNCFP + Sbjct: 11 SVKHILLDSLVVMKIVKHVDSELHAGISEVSGDACAGVLTGLVFLEDSRLEITNCFPTVR 70 Query: 195 HDDTMDEE 218 ++ MD++ Sbjct: 71 NEPVMDDD 78 >UniRef50_Q9UT48 Cluster: Translation initiation factor eIF3h; n=1; Schizosaccharomyces pombe|Rep: Translation initiation factor eIF3h - Schizosaccharomyces pombe (Fission yeast) Length = 357 Score = 64.5 bits (150), Expect = 2e-09 Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Frame = +2 Query: 272 HVGWYQSADVGNFLSLSL-LESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAI 448 HVGWY A V +FLS +E+QY YQ + S+ +YD +S+ G L ++AY+LTP+ + Sbjct: 104 HVGWYLGAYVSSFLSSPFFVETQYAYQKANPNSIAFLYDLSQSSNGTLYMRAYQLTPEFM 163 Query: 449 AMYKEGDYTPEALRN 493 A ++E +T +L + Sbjct: 164 AAHEEKTWTASSLNS 178 Score = 36.7 bits (81), Expect = 0.55 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Frame = +3 Query: 21 PENEAT-IQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFP 191 PE E+ I+ V+ + L VM I+KHC +S NM G L+G+ ++ L++++ F P Sbjct: 10 PELESPPIERVELESLLVMNIIKHC-RDSFPNMGTI-GQLVGIDIDGVLQVSSSFESP 65 >UniRef50_Q5DFV0 Cluster: SJCHGC06090 protein; n=1; Schistosoma japonicum|Rep: SJCHGC06090 protein - Schistosoma japonicum (Blood fluke) Length = 348 Score = 61.3 bits (142), Expect = 2e-08 Identities = 28/55 (50%), Positives = 34/55 (61%) Frame = +3 Query: 39 IQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKHDD 203 I VQ +G +K++KH EES S+ G LLGL +RLEITNCFP PK D Sbjct: 11 IDTVQVEGKVFLKMIKHYEEESVSSQNFVNGVLLGLAQGSRLEITNCFPLPKTQD 65 Score = 54.8 bits (126), Expect = 2e-06 Identities = 24/73 (32%), Positives = 47/73 (64%) Frame = +2 Query: 251 KINVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYR 430 ++ D+ +VG+YQ+ G ++ + +E+ Y Q+++ ESV++ YD +++RG + LKAYR Sbjct: 87 QLQTDYLNVGFYQAGPGGVSINRANIENIYQRQSNLPESVLLTYDPTRTSRGQIGLKAYR 146 Query: 431 LTPQAIAMYKEGD 469 L+ +A E + Sbjct: 147 LSDDVLAARSEAE 159 >UniRef50_A4S6W8 Cluster: Predicted protein; n=1; Ostreococcus lucimarinus CCE9901|Rep: Predicted protein - Ostreococcus lucimarinus CCE9901 Length = 345 Score = 56.4 bits (130), Expect = 6e-07 Identities = 28/73 (38%), Positives = 41/73 (56%) Frame = +2 Query: 251 KINVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYR 430 +INVD VGWYQS +G F + L+ + Y S++ V V YD + +G LKA + Sbjct: 102 EINVDSNIVGWYQSTYLGTFYNEELIATFLSYSESLQRCVCVAYDPTYAEQGVCALKALK 161 Query: 431 LTPQAIAMYKEGD 469 L+ + I YK G+ Sbjct: 162 LSEKFIEAYKNGN 174 Score = 54.0 bits (124), Expect = 3e-06 Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 2/72 (2%) Frame = +3 Query: 9 ARRAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPF 188 A++ E +A ++ V+ DG A +KI+KHC + + + A G LLGL + L++T CFPF Sbjct: 13 AKKPQEPKAPVKAVELDGGAALKIMKHCADAAPGS---ATGQLLGLDIGASLDVTACFPF 69 Query: 189 PK--HDDTMDEE 218 PK DD D + Sbjct: 70 PKVTADDQYDPD 81 >UniRef50_Q4UE08 Cluster: Eukaryotic translation initation factor 3, putative; n=3; Piroplasmida|Rep: Eukaryotic translation initation factor 3, putative - Theileria annulata Length = 367 Score = 52.0 bits (119), Expect = 1e-05 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = +3 Query: 30 EATIQYVQCDGLAVMKIVKHCHEESCSNMEV-AQGALLGLVVENRLEITNCFPFPKHDD 203 + T YV+ D L ++K +KHC + N V G LLGL +RLE+TNCFP+P+ D Sbjct: 30 QKTQSYVEIDSLVLIKAIKHCKD----NYPVPVNGQLLGLDFGDRLEVTNCFPYPQKRD 84 Score = 49.2 bits (112), Expect = 1e-04 Identities = 21/72 (29%), Positives = 43/72 (59%) Frame = +2 Query: 254 INVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRL 433 + VD F +GWYQ+ + G+ S +++ YQ +++++++ +D S G ++ KAYR Sbjct: 125 VRVDCFAIGWYQTVNFGDLQSKDAIDNLVIYQDVVDKAIMLGFD-PVSTTGEVSFKAYRA 183 Query: 434 TPQAIAMYKEGD 469 + Q +++Y D Sbjct: 184 SDQLLSVYHSSD 195 >UniRef50_Q00WM8 Cluster: Translation initiation factor 3, subunit h; n=1; Ostreococcus tauri|Rep: Translation initiation factor 3, subunit h - Ostreococcus tauri Length = 220 Score = 47.6 bits (108), Expect = 3e-04 Identities = 24/54 (44%), Positives = 34/54 (62%) Frame = +3 Query: 33 ATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPK 194 A ++ V+ DG A +KI+KHC + S + A G LLGL + L++T FPFPK Sbjct: 25 APVRAVELDGGAALKIIKHCADASPGS---ATGQLLGLDIGAALDVTAAFPFPK 75 >UniRef50_Q5CXR9 Cluster: EIF3 gamma/P40 with JAB/PAD domains; translation initiation factor IF- 3 subunit 3; n=2; Cryptosporidium|Rep: EIF3 gamma/P40 with JAB/PAD domains; translation initiation factor IF- 3 subunit 3 - Cryptosporidium parvum Iowa II Length = 450 Score = 47.2 bits (107), Expect = 4e-04 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = +3 Query: 30 EATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKHDDTM 209 + T+ V+ D A+++I+KHC E+ S M A G LLG+ N+LEIT F P +D + Sbjct: 107 KTTVSSVEADISAILRIIKHC-TENYSQMN-ATGQLLGMEYGNKLEITTSFQLPTREDLL 164 >UniRef50_Q4PI64 Cluster: Putative uncharacterized protein; n=1; Ustilago maydis|Rep: Putative uncharacterized protein - Ustilago maydis (Smut fungus) Length = 403 Score = 46.8 bits (106), Expect = 5e-04 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 3/64 (4%) Frame = +3 Query: 39 IQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFP---KHDDTM 209 I V+ DGLA+ KIVKHC + ++ A GALLG+ + LEI+N F P + + Sbjct: 54 ITSVRLDGLALTKIVKHCRD---AHPASASGALLGMDLGGTLEISNVFALPNPGRSNSER 110 Query: 210 DEEE 221 DEEE Sbjct: 111 DEEE 114 Score = 46.4 bits (105), Expect = 7e-04 Identities = 26/93 (27%), Positives = 52/93 (55%), Gaps = 8/93 (8%) Frame = +2 Query: 254 INVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIE--------ESVVVIYDTKKSARGF 409 +N D VG YQ +G FL+ S+++ +E + V++++D +SA+G Sbjct: 135 VNADANPVGLYQGCFLGAFLNSSVIDGLAAITGLVERDGAGSRGKGVLIVHDLAQSAQGN 194 Query: 410 LTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGY 508 ++KAYRL+P + +K+G + ++L + K+ + Sbjct: 195 TSVKAYRLSPSFVDAHKKGKFHTQSLIDHKLTF 227 >UniRef50_Q086Y6 Cluster: TonB-dependent receptor, plug precursor; n=4; Shewanella|Rep: TonB-dependent receptor, plug precursor - Shewanella frigidimarina (strain NCIMB 400) Length = 659 Score = 44.4 bits (100), Expect = 0.003 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Frame = +2 Query: 320 SLLESQYHYQTSIEESVVVI--YDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRN 493 S + + YQT IE+ V + +D + A G LTL Y P+ +A + EG+++ E Sbjct: 223 SSILGRLQYQTDIEDFFVEVNHFDNDRQAPGALTLAQYEADPRQVASFSEGEFSHEITTA 282 Query: 494 LKIGYKIYSLKCQLLSGTL 550 L+ GY+ K L L Sbjct: 283 LRSGYQYQLNKIWALGADL 301 >UniRef50_Q6C1I3 Cluster: Similar to wi|NCU07929.1 Neurospora crassa NCU07929. 1 hypothetical protein; n=1; Yarrowia lipolytica|Rep: Similar to wi|NCU07929.1 Neurospora crassa NCU07929. 1 hypothetical protein - Yarrowia lipolytica (Candida lipolytica) Length = 347 Score = 43.2 bits (97), Expect = 0.006 Identities = 19/53 (35%), Positives = 31/53 (58%) Frame = +2 Query: 239 EEASKINVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKS 397 + ++NVD VGWYQS +G + S++E+ +Q +SVV++YD S Sbjct: 80 DHLKEVNVDSNSVGWYQSTVLGRIYNASVIENLAVFQEKNPDSVVLVYDVAGS 132 Score = 39.9 bits (89), Expect = 0.060 Identities = 21/54 (38%), Positives = 30/54 (55%) Frame = +3 Query: 36 TIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKH 197 T V D +KIV+HC E + S + G LLGL V+ L I++ F FP++ Sbjct: 2 TTTRVCIDSSVALKIVRHCQESAPS---IVAGQLLGLDVDGELRISHAFAFPQN 52 >UniRef50_Q23AY3 Cluster: Mov34/MPN/PAD-1 family protein; n=1; Tetrahymena thermophila SB210|Rep: Mov34/MPN/PAD-1 family protein - Tetrahymena thermophila SB210 Length = 285 Score = 42.3 bits (95), Expect = 0.011 Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Frame = +2 Query: 245 ASKINVDHFHVGWYQ-SADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLT-L 418 + ++++D+ VGWY S+ NF++ E Q +YQ + + +IYD ++ RG Sbjct: 72 SEEVHLDNNKVGWYHVSSKSDNFVASDSFEQQSNYQVNNPNCIYLIYDNLEALRGVNNPY 131 Query: 419 KAYRLTPQAIAMYKE 463 KAYR++ + I + ++ Sbjct: 132 KAYRVSDKYIDLSEQ 146 >UniRef50_A3LZL2 Cluster: Predicted protein; n=5; Saccharomycetales|Rep: Predicted protein - Pichia stipitis (Yeast) Length = 335 Score = 41.5 bits (93), Expect = 0.020 Identities = 22/77 (28%), Positives = 41/77 (53%) Frame = +2 Query: 278 GWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMY 457 GW+QS GNF++ L+E Q + + + ++I++ + + LKA+RL+ I Y Sbjct: 99 GWFQSTVSGNFVTTQLIEGLAQQQLTNKNAFILIHNMASVGKE-VELKAFRLSEGFIGAY 157 Query: 458 KEGDYTPEALRNLKIGY 508 +G + + L K+ Y Sbjct: 158 IDGKWKSKDLEANKLTY 174 >UniRef50_A0C2G9 Cluster: Chromosome undetermined scaffold_144, whole genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome undetermined scaffold_144, whole genome shotgun sequence - Paramecium tetraurelia Length = 308 Score = 40.7 bits (91), Expect = 0.034 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Frame = +2 Query: 275 VGWYQS-ADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQA 445 +GWY S G +LS + +Q Y+ ++S+ V+ D +S RG + + A+RL PQ+ Sbjct: 108 IGWYHSHPSYGCWLSSVDINTQQSYEQLNKKSIAVVIDPIQSVRGKVVIDAFRLIPQS 165 >UniRef50_A0BC37 Cluster: Chromosome undetermined scaffold_1, whole genome shotgun sequence; n=2; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_1, whole genome shotgun sequence - Paramecium tetraurelia Length = 273 Score = 40.7 bits (91), Expect = 0.034 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Frame = +3 Query: 48 VQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPKHDDTMDEE-EY 224 V+ D +A MKI+K ++ N G LLG++ +E+TNCFP ++ D++ EY Sbjct: 13 VKLDTIAAMKIIKQANDNPTVNQ---YGYLLGIIEGETIEVTNCFPTIDIEEEQDQQYEY 69 >UniRef50_Q7R3D6 Cluster: GLP_111_4773_5777; n=2; Giardia intestinalis|Rep: GLP_111_4773_5777 - Giardia lamblia ATCC 50803 Length = 334 Score = 39.9 bits (89), Expect = 0.060 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Frame = +2 Query: 239 EEASKINVDHFHVGWYQSADVGNFLSLSLLESQYH--YQTSIEESVVVIYDTKKSARGFL 412 E K+NV VGWY S G F LS ++ H ++ S+ ++ D S G L Sbjct: 104 EMLKKVNVPENCVGWYHS-HPGYFAWLSHIDQNTHKSFERLDYRSIAIVLDPMNSTSGKL 162 Query: 413 TLKAYRLTPQA 445 ++A+RL P A Sbjct: 163 VIEAFRLIPGA 173 >UniRef50_Q6ZTT3 Cluster: CDNA FLJ44237 fis, clone THYMU3007845; n=1; Homo sapiens|Rep: CDNA FLJ44237 fis, clone THYMU3007845 - Homo sapiens (Human) Length = 139 Score = 35.1 bits (77), Expect = 1.7 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Frame = -3 Query: 222 IPPHPWCRHALEMGSSW*SPDGSQRPNQGE-LPEPPPCCCMI--LHDSVSL 79 +P C A+ + W +Q G LP PPPCCC++ LH S SL Sbjct: 3 LPGLTLCSGAVGTSTQWLMAALAQLSRPGRRLPPPPPCCCLVQPLHGSSSL 53 >UniRef50_Q1IM63 Cluster: Amino acid transporter; n=1; Acidobacteria bacterium Ellin345|Rep: Amino acid transporter - Acidobacteria bacterium (strain Ellin345) Length = 464 Score = 34.3 bits (75), Expect = 3.0 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Frame = +1 Query: 514 LFIEVPIVIRNSPLTNIMISELTEMIPEEEGIQVFWIWVLHLF-SKGQLSQSSW 672 +FI V ++ + P T +M++ELT M+PEE G F++W+ F S + Q+ W Sbjct: 60 VFILVTPLLWSLP-TALMVAELTAMMPEEGG---FYVWIRETFGSLWAVQQACW 109 >UniRef50_A0DDR5 Cluster: Chromosome undetermined scaffold_47, whole genome shotgun sequence; n=1; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_47, whole genome shotgun sequence - Paramecium tetraurelia Length = 589 Score = 33.9 bits (74), Expect = 3.9 Identities = 18/70 (25%), Positives = 34/70 (48%) Frame = +2 Query: 329 ESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRNLKIGY 508 E Q Y+ IE+ + + ++ + L + +TP+ + + DY PE L K+ Sbjct: 188 EEQQKYKNQIEQLELDNKNLQRENKKVLQILNQNITPKQTKLLNKNDYLPEELEISKLKV 247 Query: 509 KIYSLKCQLL 538 KI L+ Q++ Sbjct: 248 KITQLQQQMI 257 >UniRef50_UPI00006A22D6 Cluster: YY1-associated protein 1 (Hepatocellular carcinoma susceptibility protein) (Hepatocellular carcinoma-associated protein 2).; n=1; Xenopus tropicalis|Rep: YY1-associated protein 1 (Hepatocellular carcinoma susceptibility protein) (Hepatocellular carcinoma-associated protein 2). - Xenopus tropicalis Length = 622 Score = 33.5 bits (73), Expect = 5.2 Identities = 23/69 (33%), Positives = 29/69 (42%) Frame = -3 Query: 231 PTGIPPHPWCRHALEMGSSW*SPDGSQRPNQGELPEPPPCCCMILHDSVSLFSSLPVHRT 52 P + P +C H+ G SW P G N L PPP H +F LP+ T Sbjct: 176 PPSLQPVWFCLHSFRAGGSWPLPLG----NSSTLSPPPP------HPPAGVFFLLPILLT 225 Query: 51 EHIGSSLHF 25 +GS L F Sbjct: 226 LLLGSLLSF 234 >UniRef50_A6SB92 Cluster: Predicted protein; n=1; Botryotinia fuckeliana B05.10|Rep: Predicted protein - Botryotinia fuckeliana B05.10 Length = 365 Score = 33.5 bits (73), Expect = 5.2 Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = +3 Query: 54 CDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVE--NRLEITNCFPFPKHDDTMDEE 218 CD + I +HCH+++ S +++ + A + L V+ LE+ +C+ + + D +D+E Sbjct: 113 CD-VITETITEHCHDDTMSAIDILKQACINLSVKTGTTLEVHDCWLYWRKRDDVDKE 168 >UniRef50_P72671 Cluster: Slr0727 protein; n=1; Synechocystis sp. PCC 6803|Rep: Slr0727 protein - Synechocystis sp. (strain PCC 6803) Length = 324 Score = 33.1 bits (72), Expect = 6.8 Identities = 22/72 (30%), Positives = 34/72 (47%) Frame = +2 Query: 284 YQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKE 463 Y+ VG ++ + S +H SIEES+ +Y+ KKS L +L + + E Sbjct: 195 YKYGKVGEMYIMNSMASLFHQMHSIEESIKFLYEKKKSDEYIKELCENKL---MVTIESE 251 Query: 464 GDYTPEALRNLK 499 + E LR LK Sbjct: 252 LNVCRERLRELK 263 >UniRef50_Q1ITW3 Cluster: Tryptophan 2,3-dioxygenase; n=9; Bacteria|Rep: Tryptophan 2,3-dioxygenase - Acidobacteria bacterium (strain Ellin345) Length = 629 Score = 33.1 bits (72), Expect = 6.8 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -1 Query: 263 QH*SSKPPHHVQLVFLLIHGVVMLWKWEAVGNLQTVL 153 Q S+PP H +L+F++IH LW E + +L+ V+ Sbjct: 376 QQLQSEPPRHDELLFIVIHQTYELWFKELLHDLEAVV 412 >UniRef50_A3TZZ3 Cluster: Putative uncharacterized protein; n=1; Oceanicola batsensis HTCC2597|Rep: Putative uncharacterized protein - Oceanicola batsensis HTCC2597 Length = 246 Score = 33.1 bits (72), Expect = 6.8 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +1 Query: 91 VMKNH-AATWRWLRELSLV--WSLRTVWRLPTASHFQSMTTPWMRRNTSW 231 VM NH AA W WL+EL L SL + R P A QS W++ SW Sbjct: 33 VMDNHRAALWCWLQELDLTAPHSLIHIDRHPDA--LQSRLDEWLKHLPSW 80 >UniRef50_A7RMN7 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 970 Score = 33.1 bits (72), Expect = 6.8 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -3 Query: 165 PDGSQRPNQGELPEPPPCCCMIL 97 P S+ G+LP PPPCCC +L Sbjct: 595 PLSSEDNPSGKLPLPPPCCCYVL 617 >UniRef50_Q5KSC5 Cluster: RNA-dependent RNA polymerase; n=1; Hordeum vulgare|Rep: RNA-dependent RNA polymerase - Hordeum vulgare (Barley) Length = 277 Score = 32.7 bits (71), Expect = 9.0 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -3 Query: 648 LREQMQYPDPKNLDPFLFRYHLGELRDHYVS*WRVPDNNWHF 523 L +Q + D K LD + YH+ +++ +S WR NNW+F Sbjct: 24 LEQQDRQTDDKLLDVEMAIYHMLGVQEELLSLWRQCHNNWNF 65 >UniRef50_Q9VN50 Cluster: CG9769-PA; n=8; Endopterygota|Rep: CG9769-PA - Drosophila melanogaster (Fruit fly) Length = 280 Score = 32.7 bits (71), Expect = 9.0 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%) Frame = +3 Query: 129 GALLGLVVENRLEITNCF--PFPKHDDTMDEE 218 G LLG V + +E+TNCF P +HDD ++ E Sbjct: 34 GTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAE 65 >UniRef50_A4R0I9 Cluster: Predicted protein; n=1; Magnaporthe grisea|Rep: Predicted protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea) Length = 493 Score = 32.7 bits (71), Expect = 9.0 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +1 Query: 151 LRTVWRLPTASHFQSMTTPWMRRNTSW 231 +R VW L + S TTPW+RR+ W Sbjct: 1 MRLVWLLLVTGVYASPTTPWVRRDKGW 27 >UniRef50_O00303 Cluster: Eukaryotic translation initiation factor 3 subunit 5; n=38; Eumetazoa|Rep: Eukaryotic translation initiation factor 3 subunit 5 - Homo sapiens (Human) Length = 357 Score = 32.7 bits (71), Expect = 9.0 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = +3 Query: 129 GALLGLVVENRLEITNCFPFPKHDDTMDE 215 G LLG V ++ +E+TNCF P H+++ DE Sbjct: 118 GTLLGTVDKHSVEVTNCFSVP-HNESEDE 145 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 747,041,150 Number of Sequences: 1657284 Number of extensions: 16114455 Number of successful extensions: 40237 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 38610 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 40190 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 56198352344 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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