Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30844
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160896-1|AAD46836.2|  337|Drosophila melanogaster GM14618p pro...   159   4e-39
AE014134-863|AAS64639.1|  338|Drosophila melanogaster CG9124-PB,...   159   4e-39
AE014134-862|AAF52210.3|  338|Drosophila melanogaster CG9124-PA,...   159   4e-39
AY118972-1|AAM50832.1|  280|Drosophila melanogaster LD47792p pro...    33   0.50 
AE014297-137|AAF52101.1|  280|Drosophila melanogaster CG9769-PA ...    33   0.50 
AJ000387-2|CAA04049.1|  343|Drosophila melanogaster Gag protein ...    29   6.2  
AY940435-1|AAX38184.1|  141|Drosophila melanogaster glycoprotein...    29   8.1  

>AF160896-1|AAD46836.2|  337|Drosophila melanogaster GM14618p
           protein.
          Length = 337

 Score =  159 bits (385), Expect = 4e-39
 Identities = 69/87 (79%), Positives = 81/87 (93%)
 Frame = +2

Query: 251 KINVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYR 430
           ++NVDH HVGWYQS+DVGN LS++LLESQYHYQTSIEESVVV+YDT+KS+RGFL LKAYR
Sbjct: 89  RVNVDHLHVGWYQSSDVGNSLSMALLESQYHYQTSIEESVVVVYDTQKSSRGFLCLKAYR 148

Query: 431 LTPQAIAMYKEGDYTPEALRNLKIGYK 511
           LTPQAI MYK+GD+TPEA R LK+GY+
Sbjct: 149 LTPQAIQMYKDGDFTPEAFRTLKVGYE 175



 Score =  114 bits (274), Expect = 1e-25
 Identities = 55/74 (74%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
 Frame = +3

Query: 9   ARRAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPF 188
           A R  +++ TI YVQCDGLAVMK+VKHCHEES SNM++AQGALLGLVV+  LEITNCFPF
Sbjct: 8   AARTEDSDNTINYVQCDGLAVMKMVKHCHEES-SNMDLAQGALLGLVVDKCLEITNCFPF 66

Query: 189 PKH-DDTMDEEEYQ 227
           PK  D+TMDEE YQ
Sbjct: 67  PKSGDETMDEEMYQ 80



 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 23/32 (71%), Positives = 30/32 (93%)
 Frame = +1

Query: 511 NLFIEVPIVIRNSPLTNIMISELTEMIPEEEG 606
           NLF E+PIVI+NSPLTNIM+SEL E++PE++G
Sbjct: 176 NLFAEIPIVIKNSPLTNIMMSELNELLPEDKG 207


>AE014134-863|AAS64639.1|  338|Drosophila melanogaster CG9124-PB,
           isoform B protein.
          Length = 338

 Score =  159 bits (385), Expect = 4e-39
 Identities = 69/87 (79%), Positives = 81/87 (93%)
 Frame = +2

Query: 251 KINVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYR 430
           ++NVDH HVGWYQS+DVGN LS++LLESQYHYQTSIEESVVV+YDT+KS+RGFL LKAYR
Sbjct: 90  RVNVDHLHVGWYQSSDVGNSLSMALLESQYHYQTSIEESVVVVYDTQKSSRGFLCLKAYR 149

Query: 431 LTPQAIAMYKEGDYTPEALRNLKIGYK 511
           LTPQAI MYK+GD+TPEA R LK+GY+
Sbjct: 150 LTPQAIQMYKDGDFTPEAFRTLKVGYE 176



 Score =  114 bits (274), Expect = 1e-25
 Identities = 55/74 (74%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
 Frame = +3

Query: 9   ARRAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPF 188
           A R  +++ TI YVQCDGLAVMK+VKHCHEES SNM++AQGALLGLVV+  LEITNCFPF
Sbjct: 9   AARTEDSDNTINYVQCDGLAVMKMVKHCHEES-SNMDLAQGALLGLVVDKCLEITNCFPF 67

Query: 189 PKH-DDTMDEEEYQ 227
           PK  D+TMDEE YQ
Sbjct: 68  PKSGDETMDEEMYQ 81



 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 23/32 (71%), Positives = 30/32 (93%)
 Frame = +1

Query: 511 NLFIEVPIVIRNSPLTNIMISELTEMIPEEEG 606
           NLF E+PIVI+NSPLTNIM+SEL E++PE++G
Sbjct: 177 NLFAEIPIVIKNSPLTNIMMSELNELLPEDKG 208


>AE014134-862|AAF52210.3|  338|Drosophila melanogaster CG9124-PA,
           isoform A protein.
          Length = 338

 Score =  159 bits (385), Expect = 4e-39
 Identities = 69/87 (79%), Positives = 81/87 (93%)
 Frame = +2

Query: 251 KINVDHFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYR 430
           ++NVDH HVGWYQS+DVGN LS++LLESQYHYQTSIEESVVV+YDT+KS+RGFL LKAYR
Sbjct: 90  RVNVDHLHVGWYQSSDVGNSLSMALLESQYHYQTSIEESVVVVYDTQKSSRGFLCLKAYR 149

Query: 431 LTPQAIAMYKEGDYTPEALRNLKIGYK 511
           LTPQAI MYK+GD+TPEA R LK+GY+
Sbjct: 150 LTPQAIQMYKDGDFTPEAFRTLKVGYE 176



 Score =  114 bits (274), Expect = 1e-25
 Identities = 55/74 (74%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
 Frame = +3

Query: 9   ARRAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPF 188
           A R  +++ TI YVQCDGLAVMK+VKHCHEES SNM++AQGALLGLVV+  LEITNCFPF
Sbjct: 9   AARTEDSDNTINYVQCDGLAVMKMVKHCHEES-SNMDLAQGALLGLVVDKCLEITNCFPF 67

Query: 189 PKH-DDTMDEEEYQ 227
           PK  D+TMDEE YQ
Sbjct: 68  PKSGDETMDEEMYQ 81



 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 23/32 (71%), Positives = 30/32 (93%)
 Frame = +1

Query: 511 NLFIEVPIVIRNSPLTNIMISELTEMIPEEEG 606
           NLF E+PIVI+NSPLTNIM+SEL E++PE++G
Sbjct: 177 NLFAEIPIVIKNSPLTNIMMSELNELLPEDKG 208


>AY118972-1|AAM50832.1|  280|Drosophila melanogaster LD47792p
           protein.
          Length = 280

 Score = 32.7 bits (71), Expect = 0.50
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +3

Query: 129 GALLGLVVENRLEITNCF--PFPKHDDTMDEE 218
           G LLG V +  +E+TNCF  P  +HDD ++ E
Sbjct: 34  GTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAE 65


>AE014297-137|AAF52101.1|  280|Drosophila melanogaster CG9769-PA
           protein.
          Length = 280

 Score = 32.7 bits (71), Expect = 0.50
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +3

Query: 129 GALLGLVVENRLEITNCF--PFPKHDDTMDEE 218
           G LLG V +  +E+TNCF  P  +HDD ++ E
Sbjct: 34  GTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAE 65


>AJ000387-2|CAA04049.1|  343|Drosophila melanogaster Gag protein
           protein.
          Length = 343

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 344 YQTSIEESVVVIYDTKKSARGFLTLKAYR 430
           Y TS+EE +++I  T ++  G LTL+A R
Sbjct: 105 YITSVEEIIMLIRGTDQTPYGLLTLRAIR 133


>AY940435-1|AAX38184.1|  141|Drosophila melanogaster glycoprotein
           hormone alpha 2 protein.
          Length = 141

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
 Frame = +1

Query: 292 CR--CRQFSKPFVIRVTISLSDLY*--------GECCCDLRYKEISQRILDFEGL 426
           CR  C  FS P +  +  SLS L+         G+CC  ++ +EI +R+L  EG+
Sbjct: 68  CRGFCESFSVPSIPMMGSSLSVLFKPPKPVVSVGQCCNMMKSEEIQRRVLCIEGI 122


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,218,093
Number of Sequences: 53049
Number of extensions: 799278
Number of successful extensions: 1994
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1988
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)