BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30844 (704 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 2.8 AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 23 3.7 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 3.7 DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 4.9 AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 6.5 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.6 AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 8.6 >AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform A protein. Length = 782 Score = 23.0 bits (47), Expect = 2.8 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +2 Query: 626 GYCICSRRDNFRSLHGNVFDELESR 700 G CI SRR+ ++H F ++ R Sbjct: 49 GQCISSRRNGRHNVHSLAFGAIQLR 73 >AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin releasing hormone-binding protein protein. Length = 332 Score = 22.6 bits (46), Expect = 3.7 Identities = 13/48 (27%), Positives = 19/48 (39%) Frame = +2 Query: 350 TSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPEALRN 493 TS + V+ Y KS +GF + P+ + P LRN Sbjct: 163 TSSQNIAVIEYRIPKSGKGFSLFARFLKNPRPCNVLATSLTEPYTLRN 210 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 22.6 bits (46), Expect = 3.7 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = -3 Query: 225 GIPPHPWCRHALEMGSSW*SPDGSQRPNQGELPEPPPC 112 G+ PH R GS+ D R + + P+PP C Sbjct: 534 GLCPH---RRRANSGSTSSGDDELHRASLSKTPQPPQC 568 >DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine receptor alpha3subunit protein. Length = 566 Score = 22.2 bits (45), Expect = 4.9 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -1 Query: 83 HYFHHCQSIALNILDRRFI 27 H++HHC I I RFI Sbjct: 471 HHWHHCPEIYKAIEGIRFI 489 >AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase protein. Length = 628 Score = 21.8 bits (44), Expect = 6.5 Identities = 8/22 (36%), Positives = 12/22 (54%) Frame = -3 Query: 147 PNQGELPEPPPCCCMILHDSVS 82 P +P+P P C ++ SVS Sbjct: 582 PKLKGIPDPXPNTCKVIASSVS 603 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 21.4 bits (43), Expect = 8.6 Identities = 8/13 (61%), Positives = 11/13 (84%) Frame = -2 Query: 409 ESSG*FLCIVNHN 371 E SG +LCIVN++ Sbjct: 280 EDSGKYLCIVNNS 292 >AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein protein. Length = 352 Score = 21.4 bits (43), Expect = 8.6 Identities = 14/68 (20%), Positives = 23/68 (33%) Frame = -1 Query: 431 NDRPSKSRILWLISLYRKSQQHSPQ*RSDSDIVTLITKGLENCLHLHSGTIQHENDQH*S 252 N PS + L + H D L+ + + +H +Q + QH S Sbjct: 129 NGHPSTPIVYASCKLQAAAVDHQGSVLDGPDSPPLVESQMHHQMHTQHPHMQPQQGQHQS 188 Query: 251 SKPPHHVQ 228 H+Q Sbjct: 189 QAQQQHLQ 196 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 204,303 Number of Sequences: 438 Number of extensions: 4397 Number of successful extensions: 9 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21683070 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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