Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30843
         (553 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B46A2 Cluster: PREDICTED: similar to LD10526p; ...    98   1e-19
UniRef50_Q9VWF2 Cluster: Supporter of activation of yellow prote...    94   2e-18
UniRef50_Q4H2G5 Cluster: Zinc finger protein; n=1; Ciona intesti...    79   5e-14
UniRef50_Q4RKS6 Cluster: Chromosome 5 SCAF15026, whole genome sh...    77   4e-13
UniRef50_Q8WUB8 Cluster: PHD finger protein 10; n=31; Euteleosto...    75   1e-12
UniRef50_UPI0000584D69 Cluster: PREDICTED: similar to PHD finger...    72   8e-12
UniRef50_Q2A950 Cluster: Putative uncharacterized protein; n=3; ...    46   6e-04
UniRef50_A7SKM5 Cluster: Predicted protein; n=1; Nematostella ve...    45   0.001
UniRef50_A5KCJ7 Cluster: Mannose-6-phosphate isomerase, putative...    34   2.5  
UniRef50_UPI00006CC95D Cluster: hypothetical protein TTHERM_0034...    33   3.3  
UniRef50_A4VD71 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  
UniRef50_A2EKG1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  

>UniRef50_UPI00015B46A2 Cluster: PREDICTED: similar to LD10526p;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           LD10526p - Nasonia vitripennis
          Length = 404

 Score = 97.9 bits (233), Expect = 1e-19
 Identities = 41/78 (52%), Positives = 61/78 (78%)
 Frame = -3

Query: 509 AMFLGVKSFKRRYPELKRRSIVGDEKDYVLAKRLATEALCDLGITAVDASEVLDIMLSDY 330
           + +LGVKSFKR+YP+LKRR +  +E++++    L +E++CD+G+TAV +SEVLDIM SD+
Sbjct: 7   SQYLGVKSFKRKYPDLKRRMVDMEERNFLRENGLVSESMCDMGLTAVSSSEVLDIMCSDF 66

Query: 329 PHKYEEYRAYQRERQLTE 276
           P +YEEYR + RE+   E
Sbjct: 67  PEQYEEYRKHMREKAAKE 84


>UniRef50_Q9VWF2 Cluster: Supporter of activation of yellow protein;
            n=1; Drosophila melanogaster|Rep: Supporter of activation
            of yellow protein - Drosophila melanogaster (Fruit fly)
          Length = 2006

 Score = 94.3 bits (224), Expect = 2e-18
 Identities = 43/80 (53%), Positives = 61/80 (76%)
 Frame = -3

Query: 509  AMFLGVKSFKRRYPELKRRSIVGDEKDYVLAKRLATEALCDLGITAVDASEVLDIMLSDY 330
            A++LG+ SFKR+YP+L RRS+  +E++++  K L +E LCDLGITAV AS++LDIM +D+
Sbjct: 1346 ALYLGITSFKRKYPDLPRRSVDMEERNWLQEKGLVSEKLCDLGITAVWASDILDIMYADF 1405

Query: 329  PHKYEEYRAYQRERQLTEPE 270
              KYEEY+ Y R + L E E
Sbjct: 1406 FDKYEEYKEYIRRKHLREIE 1425


>UniRef50_Q4H2G5 Cluster: Zinc finger protein; n=1; Ciona
           intestinalis|Rep: Zinc finger protein - Ciona
           intestinalis (Transparent sea squirt)
          Length = 667

 Score = 79.4 bits (187), Expect = 5e-14
 Identities = 32/73 (43%), Positives = 52/73 (71%)
 Frame = -3

Query: 503 FLGVKSFKRRYPELKRRSIVGDEKDYVLAKRLATEALCDLGITAVDASEVLDIMLSDYPH 324
           +LG+ SFKR+YPE++RR +  DE +++L   + +E    LG+TA+ +S+V D+M+ +YP 
Sbjct: 129 YLGITSFKRKYPEIERRKVEADEVNHLLTSHVISEVQVTLGLTALKSSDVCDMMMKEYPE 188

Query: 323 KYEEYRAYQRERQ 285
           KY EY A  +ER+
Sbjct: 189 KYNEYNAALQERE 201


>UniRef50_Q4RKS6 Cluster: Chromosome 5 SCAF15026, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 5
           SCAF15026, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 512

 Score = 76.6 bits (180), Expect = 4e-13
 Identities = 32/73 (43%), Positives = 51/73 (69%)
 Frame = -3

Query: 503 FLGVKSFKRRYPELKRRSIVGDEKDYVLAKRLATEALCDLGITAVDASEVLDIMLSDYPH 324
           +LGV SFKR+YP+++RR +   EK Y+  + + TE  C LG+TA+ + EV+D+M+ +YP 
Sbjct: 93  YLGVTSFKRKYPDMERRDLSHKEKLYLREQNVITETQCTLGLTALRSDEVIDLMIKEYPT 152

Query: 323 KYEEYRAYQRERQ 285
           K+ EY    +ER+
Sbjct: 153 KHAEYSVILQERE 165


>UniRef50_Q8WUB8 Cluster: PHD finger protein 10; n=31;
           Euteleostomi|Rep: PHD finger protein 10 - Homo sapiens
           (Human)
          Length = 410

 Score = 74.9 bits (176), Expect = 1e-12
 Identities = 32/73 (43%), Positives = 50/73 (68%)
 Frame = -3

Query: 503 FLGVKSFKRRYPELKRRSIVGDEKDYVLAKRLATEALCDLGITAVDASEVLDIMLSDYPH 324
           +LGV SFKR+YP+L+RR +   EK Y+    + TE  C LG+TA+ + EV+D+M+ +YP 
Sbjct: 9   YLGVTSFKRKYPDLERRDLSHKEKLYLRELNVITETQCTLGLTALRSDEVIDLMIKEYPA 68

Query: 323 KYEEYRAYQRERQ 285
           K+ EY    +E++
Sbjct: 69  KHAEYSVILQEKE 81


>UniRef50_UPI0000584D69 Cluster: PREDICTED: similar to PHD finger
           protein 10; n=2; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to PHD finger protein 10 -
           Strongylocentrotus purpuratus
          Length = 1065

 Score = 72.1 bits (169), Expect = 8e-12
 Identities = 33/73 (45%), Positives = 49/73 (67%)
 Frame = -3

Query: 503 FLGVKSFKRRYPELKRRSIVGDEKDYVLAKRLATEALCDLGITAVDASEVLDIMLSDYPH 324
           FLGVKSFKR+YP L+RR +   EK+++  + + TE    LG+TA+   EV D+M+ DY +
Sbjct: 489 FLGVKSFKRKYPNLERRVMDIKEKEFLRERGVVTEEQVTLGLTALRGDEVYDLMMKDYTN 548

Query: 323 KYEEYRAYQRERQ 285
           +Y EY    +E+Q
Sbjct: 549 RYTEYARVIQEKQ 561


>UniRef50_Q2A950 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 447

 Score = 46.0 bits (104), Expect = 6e-04
 Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
 Frame = -3

Query: 500 LGVKSFKRRYPELKRRSIVGDEKDYV----LAKRLATEALCDLGITAVDASEVLDIMLSD 333
           L +KSF R+YP+  RR +  +E++++       +L  E L    + A+ ASE+ D+M SD
Sbjct: 85  LDIKSFSRKYPDFTRRKVNHEEREFLEWNFNVHKLLNETLL-RDMNAMRASEIHDMMQSD 143

Query: 332 YPHKYEEYR--AYQRERQ 285
           +   Y EY+    QRER+
Sbjct: 144 FGDIYMEYKKVVSQRERE 161


>UniRef50_A7SKM5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 318

 Score = 44.8 bits (101), Expect = 0.001
 Identities = 19/75 (25%), Positives = 41/75 (54%)
 Frame = -3

Query: 509 AMFLGVKSFKRRYPELKRRSIVGDEKDYVLAKRLATEALCDLGITAVDASEVLDIMLSDY 330
           A FLG++S + ++P+++   +  DEK ++L       A  D  I ++ + +   ++L  Y
Sbjct: 24  AHFLGIESLQEKHPKIEFHVLQEDEKSFLLENGFLDSAQKDQEIWSICSEDATQLVLDHY 83

Query: 329 PHKYEEYRAYQRERQ 285
           P KY+++     +R+
Sbjct: 84  PDKYQDFIQISHKRE 98


>UniRef50_A5KCJ7 Cluster: Mannose-6-phosphate isomerase, putative;
           n=1; Plasmodium vivax|Rep: Mannose-6-phosphate
           isomerase, putative - Plasmodium vivax
          Length = 865

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = -3

Query: 377 TAVDASEVLDIMLSDYPHKYEEYRAYQRERQLT--EPEEIVTE*RWKIN*QKVM*NQKNL 204
           T +   EVL   ++D   K E+Y+++ +E++LT   PEEI ++   K N Q V  + ++ 
Sbjct: 605 TMLVEGEVLSKCVNDIATKNEKYKSFLKEKELTNKSPEEIYSDVCKKKNYQDVQSDTESF 664

Query: 203 LITN 192
           +I N
Sbjct: 665 IIGN 668


>UniRef50_UPI00006CC95D Cluster: hypothetical protein
           TTHERM_00346440; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00346440 - Tetrahymena
           thermophila SB210
          Length = 135

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = -3

Query: 416 KRLATEALCDLGITAVDASEVLDIMLSDYPHKYEEYRAYQRERQLTEPEEIV 261
           K L T  LC  GI+ V   E + I +  YP   E+Y+AY+   +  E ++I+
Sbjct: 46  KSLTTLGLCKNGISNVSEIEQILISIGKYPMSEEQYQAYRNSEK--ERDQII 95


>UniRef50_A4VD71 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 159

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = +3

Query: 195 CDQKIFLILHHFLSVYLPSSFSYYLFWFSELSFPLVCTIFLILMWII**HDIQDFARIHC 374
           CD  +F +  +     L S   Y +  F++  F L  +IF   ++II    IQ+FA  +C
Sbjct: 84  CDMSLFQLKSYIFQSMLLSLTFYQVLEFNKQKFLL--SIFYDQLYIILLKQIQEFAVNYC 141

Query: 375 CY 380
           CY
Sbjct: 142 CY 143


>UniRef50_A2EKG1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 749

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 220 YITFCQFIFHLHSVTISSGSVSCLSRWYARYSSYLCG*SDSMISKTSLASTA 375
           Y   C+ +F LHS+TI S  V  +S  Y     Y+    DS+  +  L  T+
Sbjct: 267 YTCICEVVFQLHSLTIFSEDVLAISNAYTDVDQYINVIVDSLQIRDKLNETS 318


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,242,798
Number of Sequences: 1657284
Number of extensions: 8849199
Number of successful extensions: 24808
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 24104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24795
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)