Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30842
(714 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 87 2e-17
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 87 2e-17
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 87 2e-17
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 46 4e-05
BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p pro... 40 0.004
BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p pro... 40 0.004
BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p pro... 40 0.004
AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p pro... 40 0.004
AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA... 40 0.004
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 87.0 bits (206), Expect = 2e-17
Identities = 46/93 (49%), Positives = 57/93 (61%)
Frame = +2
Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT*RVSVS*YTNVDSPS*V 568
+VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WG P +
Sbjct: 94 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 153
Query: 569 DNVLPITSNSIVEKRLHKTQHYLC*GPHSMEIF 667
+PIT N ++E++L + C EIF
Sbjct: 154 RQRVPITDNFVIERKLRQAHQIQCVEDLVHEIF 186
Score = 62.9 bits (146), Expect = 4e-10
Identities = 32/67 (47%), Positives = 43/67 (64%)
Frame = +3
Query: 192 KEAFFCHQEEEGNLQEG*TVRKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 371
K+A ++ NL + EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG
Sbjct: 28 KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 87
Query: 372 INQVSPK 392
IN+V+PK
Sbjct: 88 INKVAPK 94
Score = 28.7 bits (61), Expect = 8.3
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 112 LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQY 252
LPAVPES LK + LK+ + +K+E RAE+Y
Sbjct: 1 LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKY 47
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 87.0 bits (206), Expect = 2e-17
Identities = 46/93 (49%), Positives = 57/93 (61%)
Frame = +2
Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT*RVSVS*YTNVDSPS*V 568
+VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WG P +
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 166
Query: 569 DNVLPITSNSIVEKRLHKTQHYLC*GPHSMEIF 667
+PIT N ++E++L + C EIF
Sbjct: 167 RQRVPITDNFVIERKLRQAHQIQCVEDLVHEIF 199
Score = 62.9 bits (146), Expect = 4e-10
Identities = 32/67 (47%), Positives = 43/67 (64%)
Frame = +3
Query: 192 KEAFFCHQEEEGNLQEG*TVRKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 371
K+A ++ NL + EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG
Sbjct: 41 KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100
Query: 372 INQVSPK 392
IN+V+PK
Sbjct: 101 INKVAPK 107
Score = 36.7 bits (81), Expect = 0.031
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +1
Query: 82 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQY 252
PV K +KKLPAVPES LK + LK+ + +K+E RAE+Y
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKY 60
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 87.0 bits (206), Expect = 2e-17
Identities = 46/93 (49%), Positives = 57/93 (61%)
Frame = +2
Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT*RVSVS*YTNVDSPS*V 568
+VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WG P +
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 166
Query: 569 DNVLPITSNSIVEKRLHKTQHYLC*GPHSMEIF 667
+PIT N ++E++L + C EIF
Sbjct: 167 RQRVPITDNFVIERKLRQAHQIQCVEDLVHEIF 199
Score = 62.9 bits (146), Expect = 4e-10
Identities = 32/67 (47%), Positives = 43/67 (64%)
Frame = +3
Query: 192 KEAFFCHQEEEGNLQEG*TVRKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 371
K+A ++ NL + EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG
Sbjct: 41 KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100
Query: 372 INQVSPK 392
IN+V+PK
Sbjct: 101 INKVAPK 107
Score = 36.7 bits (81), Expect = 0.031
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +1
Query: 82 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQY 252
PV K +KKLPAVPES LK + LK+ + +K+E RAE+Y
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKY 60
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 46.4 bits (105), Expect = 4e-05
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = -3
Query: 526 HSLSWG-SPSNVRLGDT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 386
H L G +P +V LGD H+ L+Q +HT+V L Q++QLQN D G
Sbjct: 44 HGLQIGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91
Score = 32.7 bits (71), Expect = 0.51
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 383 NLVDTTDSDDKCQFGFPGNVVVATIACLSG*SDFITF-LDAVFLTYCSA 240
+LVDT D+DDK QFG G+V + + + D F LD + L A
Sbjct: 93 HLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLILVLLGA 141
>BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p
protein.
Length = 257
Score = 39.5 bits (88), Expect = 0.004
Identities = 14/24 (58%), Positives = 22/24 (91%)
Frame = +1
Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576
GNP+L S+RELV+K+GFA++ G++
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517
+ + R+ +N VF+ K +LR+ EP++ +G P+
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154
>BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p
protein.
Length = 257
Score = 39.5 bits (88), Expect = 0.004
Identities = 14/24 (58%), Positives = 22/24 (91%)
Frame = +1
Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576
GNP+L S+RELV+K+GFA++ G++
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517
+ + R+ +N VF+ K +LR+ EP++ +G P+
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154
>BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p
protein.
Length = 257
Score = 39.5 bits (88), Expect = 0.004
Identities = 14/24 (58%), Positives = 22/24 (91%)
Frame = +1
Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576
GNP+L S+RELV+K+GFA++ G++
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517
+ + R+ +N VF+ K +LR+ EP++ +G P+
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154
>AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p
protein.
Length = 257
Score = 39.5 bits (88), Expect = 0.004
Identities = 14/24 (58%), Positives = 22/24 (91%)
Frame = +1
Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576
GNP+L S+RELV+K+GFA++ G++
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517
+ + R+ +N VF+ K +LR+ EP++ +G P+
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154
>AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA
protein.
Length = 257
Score = 39.5 bits (88), Expect = 0.004
Identities = 14/24 (58%), Positives = 22/24 (91%)
Frame = +1
Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576
GNP+L S+RELV+K+GFA++ G++
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517
+ + R+ +N VF+ K +LR+ EP++ +G P+
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,111,163
Number of Sequences: 53049
Number of extensions: 624984
Number of successful extensions: 1345
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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