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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30842
         (714 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal  pro...    87   2e-17
AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p pro...    87   2e-17
AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA...    87   2e-17
BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p pro...    46   4e-05
BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p pro...    40   0.004
BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p pro...    40   0.004
BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p pro...    40   0.004
AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p pro...    40   0.004
AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA...    40   0.004

>X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal
           protein protein.
          Length = 239

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 46/93 (49%), Positives = 57/93 (61%)
 Frame = +2

Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT*RVSVS*YTNVDSPS*V 568
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WG P  +               
Sbjct: 94  KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 153

Query: 569 DNVLPITSNSIVEKRLHKTQHYLC*GPHSMEIF 667
              +PIT N ++E++L +     C      EIF
Sbjct: 154 RQRVPITDNFVIERKLRQAHQIQCVEDLVHEIF 186



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 32/67 (47%), Positives = 43/67 (64%)
 Frame = +3

Query: 192 KEAFFCHQEEEGNLQEG*TVRKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 371
           K+A      ++ NL      + EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRG
Sbjct: 28  KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 87

Query: 372 INQVSPK 392
           IN+V+PK
Sbjct: 88  INKVAPK 94



 Score = 28.7 bits (61), Expect = 8.3
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 112 LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQY 252
           LPAVPES LK             +  LK+ +    +K+E   RAE+Y
Sbjct: 1   LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKY 47


>AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p
           protein.
          Length = 252

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 46/93 (49%), Positives = 57/93 (61%)
 Frame = +2

Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT*RVSVS*YTNVDSPS*V 568
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WG P  +               
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 166

Query: 569 DNVLPITSNSIVEKRLHKTQHYLC*GPHSMEIF 667
              +PIT N ++E++L +     C      EIF
Sbjct: 167 RQRVPITDNFVIERKLRQAHQIQCVEDLVHEIF 199



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 32/67 (47%), Positives = 43/67 (64%)
 Frame = +3

Query: 192 KEAFFCHQEEEGNLQEG*TVRKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 371
           K+A      ++ NL      + EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRG
Sbjct: 41  KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100

Query: 372 INQVSPK 392
           IN+V+PK
Sbjct: 101 INKVAPK 107



 Score = 36.7 bits (81), Expect = 0.031
 Identities = 22/57 (38%), Positives = 29/57 (50%)
 Frame = +1

Query: 82  PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQY 252
           PV  K  +KKLPAVPES LK             +  LK+ +    +K+E   RAE+Y
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKY 60


>AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA
           protein.
          Length = 252

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 46/93 (49%), Positives = 57/93 (61%)
 Frame = +2

Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT*RVSVS*YTNVDSPS*V 568
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WG P  +               
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 166

Query: 569 DNVLPITSNSIVEKRLHKTQHYLC*GPHSMEIF 667
              +PIT N ++E++L +     C      EIF
Sbjct: 167 RQRVPITDNFVIERKLRQAHQIQCVEDLVHEIF 199



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 32/67 (47%), Positives = 43/67 (64%)
 Frame = +3

Query: 192 KEAFFCHQEEEGNLQEG*TVRKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 371
           K+A      ++ NL      + EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRG
Sbjct: 41  KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100

Query: 372 INQVSPK 392
           IN+V+PK
Sbjct: 101 INKVAPK 107



 Score = 36.7 bits (81), Expect = 0.031
 Identities = 22/57 (38%), Positives = 29/57 (50%)
 Frame = +1

Query: 82  PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQY 252
           PV  K  +KKLPAVPES LK             +  LK+ +    +K+E   RAE+Y
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKY 60


>BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p
           protein.
          Length = 227

 Score = 46.4 bits (105), Expect = 4e-05
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
 Frame = -3

Query: 526 HSLSWG-SPSNVRLGDT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 386
           H L  G +P +V LGD  H+   L+Q  +HT+V L Q++QLQN  D G
Sbjct: 44  HGLQIGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91



 Score = 32.7 bits (71), Expect = 0.51
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 383 NLVDTTDSDDKCQFGFPGNVVVATIACLSG*SDFITF-LDAVFLTYCSA 240
           +LVDT D+DDK QFG  G+V +  +   +   D   F LD + L    A
Sbjct: 93  HLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLILVLLGA 141


>BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p
           protein.
          Length = 257

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 14/24 (58%), Positives = 22/24 (91%)
 Frame = +1

Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576
           GNP+L S+RELV+K+GFA++ G++
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +2

Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517
           + +  R+   +N VF+   K    +LR+ EP++ +G P+
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154


>BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p
           protein.
          Length = 257

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 14/24 (58%), Positives = 22/24 (91%)
 Frame = +1

Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576
           GNP+L S+RELV+K+GFA++ G++
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +2

Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517
           + +  R+   +N VF+   K    +LR+ EP++ +G P+
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154


>BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p
           protein.
          Length = 257

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 14/24 (58%), Positives = 22/24 (91%)
 Frame = +1

Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576
           GNP+L S+RELV+K+GFA++ G++
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +2

Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517
           + +  R+   +N VF+   K    +LR+ EP++ +G P+
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154


>AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p
           protein.
          Length = 257

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 14/24 (58%), Positives = 22/24 (91%)
 Frame = +1

Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576
           GNP+L S+RELV+K+GFA++ G++
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +2

Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517
           + +  R+   +N VF+   K    +LR+ EP++ +G P+
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154


>AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA
           protein.
          Length = 257

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 14/24 (58%), Positives = 22/24 (91%)
 Frame = +1

Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576
           GNP+L S+RELV+K+GFA++ G++
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +2

Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517
           + +  R+   +N VF+   K    +LR+ EP++ +G P+
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,111,163
Number of Sequences: 53049
Number of extensions: 624984
Number of successful extensions: 1345
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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