BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30842 (714 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 87 2e-17 AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 87 2e-17 AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 87 2e-17 BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 46 4e-05 BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p pro... 40 0.004 BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p pro... 40 0.004 BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p pro... 40 0.004 AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p pro... 40 0.004 AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA... 40 0.004 >X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal protein protein. Length = 239 Score = 87.0 bits (206), Expect = 2e-17 Identities = 46/93 (49%), Positives = 57/93 (61%) Frame = +2 Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT*RVSVS*YTNVDSPS*V 568 +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WG P + Sbjct: 94 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 153 Query: 569 DNVLPITSNSIVEKRLHKTQHYLC*GPHSMEIF 667 +PIT N ++E++L + C EIF Sbjct: 154 RQRVPITDNFVIERKLRQAHQIQCVEDLVHEIF 186 Score = 62.9 bits (146), Expect = 4e-10 Identities = 32/67 (47%), Positives = 43/67 (64%) Frame = +3 Query: 192 KEAFFCHQEEEGNLQEG*TVRKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 371 K+A ++ NL + EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG Sbjct: 28 KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 87 Query: 372 INQVSPK 392 IN+V+PK Sbjct: 88 INKVAPK 94 Score = 28.7 bits (61), Expect = 8.3 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +1 Query: 112 LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQY 252 LPAVPES LK + LK+ + +K+E RAE+Y Sbjct: 1 LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKY 47 >AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p protein. Length = 252 Score = 87.0 bits (206), Expect = 2e-17 Identities = 46/93 (49%), Positives = 57/93 (61%) Frame = +2 Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT*RVSVS*YTNVDSPS*V 568 +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WG P + Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 166 Query: 569 DNVLPITSNSIVEKRLHKTQHYLC*GPHSMEIF 667 +PIT N ++E++L + C EIF Sbjct: 167 RQRVPITDNFVIERKLRQAHQIQCVEDLVHEIF 199 Score = 62.9 bits (146), Expect = 4e-10 Identities = 32/67 (47%), Positives = 43/67 (64%) Frame = +3 Query: 192 KEAFFCHQEEEGNLQEG*TVRKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 371 K+A ++ NL + EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG Sbjct: 41 KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100 Query: 372 INQVSPK 392 IN+V+PK Sbjct: 101 INKVAPK 107 Score = 36.7 bits (81), Expect = 0.031 Identities = 22/57 (38%), Positives = 29/57 (50%) Frame = +1 Query: 82 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQY 252 PV K +KKLPAVPES LK + LK+ + +K+E RAE+Y Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKY 60 >AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA protein. Length = 252 Score = 87.0 bits (206), Expect = 2e-17 Identities = 46/93 (49%), Positives = 57/93 (61%) Frame = +2 Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT*RVSVS*YTNVDSPS*V 568 +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WG P + Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 166 Query: 569 DNVLPITSNSIVEKRLHKTQHYLC*GPHSMEIF 667 +PIT N ++E++L + C EIF Sbjct: 167 RQRVPITDNFVIERKLRQAHQIQCVEDLVHEIF 199 Score = 62.9 bits (146), Expect = 4e-10 Identities = 32/67 (47%), Positives = 43/67 (64%) Frame = +3 Query: 192 KEAFFCHQEEEGNLQEG*TVRKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 371 K+A ++ NL + EY E+ EI+L R A+ R +YVP EAKLAFV+RIRG Sbjct: 41 KKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRG 100 Query: 372 INQVSPK 392 IN+V+PK Sbjct: 101 INKVAPK 107 Score = 36.7 bits (81), Expect = 0.031 Identities = 22/57 (38%), Positives = 29/57 (50%) Frame = +1 Query: 82 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQY 252 PV K +KKLPAVPES LK + LK+ + +K+E RAE+Y Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKY 60 >BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p protein. Length = 227 Score = 46.4 bits (105), Expect = 4e-05 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = -3 Query: 526 HSLSWG-SPSNVRLGDT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 386 H L G +P +V LGD H+ L+Q +HT+V L Q++QLQN D G Sbjct: 44 HGLQIGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91 Score = 32.7 bits (71), Expect = 0.51 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -2 Query: 383 NLVDTTDSDDKCQFGFPGNVVVATIACLSG*SDFITF-LDAVFLTYCSA 240 +LVDT D+DDK QFG G+V + + + D F LD + L A Sbjct: 93 HLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLILVLLGA 141 >BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p protein. Length = 257 Score = 39.5 bits (88), Expect = 0.004 Identities = 14/24 (58%), Positives = 22/24 (91%) Frame = +1 Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576 GNP+L S+RELV+K+GFA++ G++ Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174 Score = 30.7 bits (66), Expect = 2.1 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = +2 Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517 + + R+ +N VF+ K +LR+ EP++ +G P+ Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154 >BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p protein. Length = 257 Score = 39.5 bits (88), Expect = 0.004 Identities = 14/24 (58%), Positives = 22/24 (91%) Frame = +1 Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576 GNP+L S+RELV+K+GFA++ G++ Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174 Score = 30.7 bits (66), Expect = 2.1 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = +2 Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517 + + R+ +N VF+ K +LR+ EP++ +G P+ Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154 >BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p protein. Length = 257 Score = 39.5 bits (88), Expect = 0.004 Identities = 14/24 (58%), Positives = 22/24 (91%) Frame = +1 Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576 GNP+L S+RELV+K+GFA++ G++ Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174 Score = 30.7 bits (66), Expect = 2.1 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = +2 Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517 + + R+ +N VF+ K +LR+ EP++ +G P+ Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154 >AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p protein. Length = 257 Score = 39.5 bits (88), Expect = 0.004 Identities = 14/24 (58%), Positives = 22/24 (91%) Frame = +1 Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576 GNP+L S+RELV+K+GFA++ G++ Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174 Score = 30.7 bits (66), Expect = 2.1 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = +2 Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517 + + R+ +N VF+ K +LR+ EP++ +G P+ Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154 >AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA protein. Length = 257 Score = 39.5 bits (88), Expect = 0.004 Identities = 14/24 (58%), Positives = 22/24 (91%) Frame = +1 Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576 GNP+L S+RELV+K+GFA++ G++ Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKK 174 Score = 30.7 bits (66), Expect = 2.1 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = +2 Query: 401 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT 517 + + R+ +N VF+ K +LR+ EP++ +G P+ Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS 154 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 30,111,163 Number of Sequences: 53049 Number of extensions: 624984 Number of successful extensions: 1345 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1288 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1339 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3170136354 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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