Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30842
(714 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) simila... 67 1e-11
At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) simila... 67 1e-11
At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) simila... 67 1e-11
At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C) 63 2e-10
At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C) 63 2e-10
At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B) 63 2e-10
At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) simila... 39 0.003
At2g44735.1 68415.m05566 expressed protein ; expression supporte... 29 2.3
At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl methyl... 29 4.0
At3g23800.1 68416.m02991 selenium-binding family protein contain... 28 5.3
At3g59970.3 68416.m06695 methylenetetrahydrofolate reductase 1 (... 28 7.1
At3g07140.2 68416.m00851 GPI transamidase component Gpi16 subuni... 28 7.1
At3g07140.1 68416.m00850 GPI transamidase component Gpi16 subuni... 28 7.1
At5g06740.1 68418.m00762 lectin protein kinase family protein co... 27 9.3
At4g14310.2 68417.m02205 peroxisomal membrane protein-related co... 27 9.3
At4g14310.1 68417.m02204 peroxisomal membrane protein-related co... 27 9.3
At1g72950.1 68414.m08437 disease resistance protein (TIR-NBS cla... 27 9.3
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 27 9.3
>At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 66.9 bits (156), Expect = 1e-11
Identities = 53/137 (38%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Frame = +3
Query: 255 KEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCLDCAK-* 431
KEY+ KER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L +
Sbjct: 55 KEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIF 114
Query: 432 TMVCLYV*IRLL*IC-YVSPSLTLLGEPQLKECP*VSIQTWIRQAEWTTYYQSLPT--AL 602
V L V + + V P +T G P LK V + R + ++ T ++
Sbjct: 115 NGVFLKVNKATINMLRRVEPYVT-YGYPNLKS---VKELIYKRGFGKLNHQRTALTDNSI 170
Query: 603 LRRGSIKHNIICVEDLI 653
+ +G KH IICVEDLI
Sbjct: 171 VDQGLGKHGIICVEDLI 187
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = +2
Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTP 514
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +G P
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYP 141
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576
G PNLKSV+EL+YKRGF KL+ QR
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQR 162
>At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 66.9 bits (156), Expect = 1e-11
Identities = 53/137 (38%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Frame = +3
Query: 255 KEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCLDCAK-* 431
KEY+ KER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L +
Sbjct: 55 KEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIF 114
Query: 432 TMVCLYV*IRLL*IC-YVSPSLTLLGEPQLKECP*VSIQTWIRQAEWTTYYQSLPT--AL 602
V L V + + V P +T G P LK V + R + ++ T ++
Sbjct: 115 NGVFLKVNKATINMLRRVEPYVT-YGYPNLKS---VKELIYKRGFGKLNHQRTALTDNSI 170
Query: 603 LRRGSIKHNIICVEDLI 653
+ +G KH IICVEDLI
Sbjct: 171 VDQGLGKHGIICVEDLI 187
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = +2
Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTP 514
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +G P
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYP 141
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576
G PNLKSV+EL+YKRGF KL+ QR
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQR 162
>At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 66.9 bits (156), Expect = 1e-11
Identities = 53/137 (38%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Frame = +3
Query: 255 KEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCLDCAK-* 431
KEY+ KER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L +
Sbjct: 55 KEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIF 114
Query: 432 TMVCLYV*IRLL*IC-YVSPSLTLLGEPQLKECP*VSIQTWIRQAEWTTYYQSLPT--AL 602
V L V + + V P +T G P LK V + R + ++ T ++
Sbjct: 115 NGVFLKVNKATINMLRRVEPYVT-YGYPNLKS---VKELIYKRGFGKLNHQRTALTDNSI 170
Query: 603 LRRGSIKHNIICVEDLI 653
+ +G KH IICVEDLI
Sbjct: 171 VDQGLGKHGIICVEDLI 187
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = +2
Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTP 514
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +G P
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYP 141
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 505 GNPNLKSVRELVYKRGFAKLSGQR 576
G PNLKSV+EL+YKRGF KL+ QR
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQR 162
>At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C)
Length = 247
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/78 (43%), Positives = 47/78 (60%)
Frame = +2
Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT*RVSVS*YTNVDSPS*V 568
+ +K+LQL RLRQI NGVF+++NKATVNMLR EPY+ +G P +
Sbjct: 103 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLN 162
Query: 569 DNVLPITSNSIVEKRLHK 622
+ +T NSIV++ L K
Sbjct: 163 HQRIALTDNSIVDQALGK 180
Score = 61.3 bits (142), Expect = 6e-10
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = +3
Query: 255 KEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCLDCAK-* 431
KEY K+ + IRL R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L +
Sbjct: 58 KEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIF 117
Query: 432 TMVCLYV*IRLL*IC-YVSPSLTLLGEPQLKECP*VSIQTWIRQAEWTTYYQSLPTALLR 608
V L V + + V P +T G P LK + + + + +++
Sbjct: 118 NGVFLKVNKATVNMLRRVEPYVT-YGYPNLKSVKELIYKRGYGKLNHQRIALT-DNSIVD 175
Query: 609 RGSIKHNIICVEDLI 653
+ KH IICVEDLI
Sbjct: 176 QALGKHGIICVEDLI 190
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 121 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVRNTASRN 276
VPESVLK + + +++ ++ IFKRAEQY + A ++
Sbjct: 13 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKD 64
>At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C)
Length = 242
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/78 (43%), Positives = 47/78 (60%)
Frame = +2
Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT*RVSVS*YTNVDSPS*V 568
+ +K+LQL RLRQI NGVF+++NKATVNMLR EPY+ +G P +
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLN 157
Query: 569 DNVLPITSNSIVEKRLHK 622
+ +T NSIV++ L K
Sbjct: 158 HQRIALTDNSIVDQALGK 175
Score = 61.3 bits (142), Expect = 6e-10
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = +3
Query: 255 KEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCLDCAK-* 431
KEY K+ + IRL R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L +
Sbjct: 53 KEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIF 112
Query: 432 TMVCLYV*IRLL*IC-YVSPSLTLLGEPQLKECP*VSIQTWIRQAEWTTYYQSLPTALLR 608
V L V + + V P +T G P LK + + + + +++
Sbjct: 113 NGVFLKVNKATVNMLRRVEPYVT-YGYPNLKSVKELIYKRGYGKLNHQRIALT-DNSIVD 170
Query: 609 RGSIKHNIICVEDLI 653
+ KH IICVEDLI
Sbjct: 171 QALGKHGIICVEDLI 185
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 121 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVRNTASRN 276
VPESVLK + + +++ ++ IFKRAEQY + A ++
Sbjct: 8 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKD 59
>At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B)
Length = 242
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/78 (43%), Positives = 47/78 (60%)
Frame = +2
Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT*RVSVS*YTNVDSPS*V 568
+ +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+ +G P +
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLN 157
Query: 569 DNVLPITSNSIVEKRLHK 622
+ +T NSIVE+ L K
Sbjct: 158 HQRIALTDNSIVEQALGK 175
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +3
Query: 255 KEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 416
KEY KE++ I L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 53 KEYAEKEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 106
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 121 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVRNTASR 273
VPESVLK Q + + ++ IFKRAEQY + A +
Sbjct: 8 VPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEK 58
>At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) similar
to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo
sapiens]
Length = 247
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +3
Query: 258 EYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 416
E+R KE D IR+ ++ + + P ++ L F+IRI+G N + PK+ + N L
Sbjct: 58 EFRAKEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNL 110
Score = 34.3 bits (75), Expect = 0.081
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 389 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGTPT*RVSVS*YTNVDSPS*V 568
+ +++L +L+ + GVF + + L +PY+ +G P + SV + +
Sbjct: 102 KTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPNDK-SVKDLIYKKGCTII 160
Query: 569 D-NVLPITSNSIVEKRL 616
+ N +P+T N+I+E+ L
Sbjct: 161 EGNPVPLTDNNIIEQAL 177
>At2g44735.1 68415.m05566 expressed protein ; expression supported
by MPSS
Length = 248
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 483 SPSLTLLGEPQLKECP*VSIQTW-IRQAEWTTY 578
SPS ++ QL+ C V I TW + EWTT+
Sbjct: 138 SPSCMVISYTQLRSCGSVLIDTWRPGETEWTTH 170
>At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 354
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 645 PQHR*CCVLWSLFSTMLLEVI 583
P HR CC W+L ST L +++
Sbjct: 212 PLHRDCCHFWTLLSTSLRDLV 232
>At3g23800.1 68416.m02991 selenium-binding family protein contains
Pfam profile: PF05694 56kDa selenium binding protein
(SBP56)
Length = 480
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 523 SLSWGSPSNVRLG-DT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDFGETWLIP 368
S SWG+P+ G D + L KH VY +L+ D G+T L+P
Sbjct: 208 STSWGAPAAFTKGFDLKDVSDGLYG--KHLHVYSWPQGELKQILDLGDTGLLP 258
>At3g59970.3 68416.m06695 methylenetetrahydrofolate reductase 1
(MTHFR1) identical to methylenetetrahydrofolate
reductase MTHFR1 [Arabidopsis thaliana] GI:5911425
Length = 592
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 344 IGICHPNPWYQPSFTEVRKVLQLFRLRQINNGVFVRLN-KATVNMLRIAEPYIAWGTP 514
IG +PW + + + +L +IN+ F+ +N + +VN + P I WG P
Sbjct: 403 IGNLKSSPWSELDGLQPETKIINEQLGKINSNGFLTINSQPSVNAAKSDSPAIGWGGP 460
>At3g07140.2 68416.m00851 GPI transamidase component Gpi16 subunit
family protein similar to phosphatidyl inositol glycan
class T (GI:14456615) [Homo sapiens]; contains Pfam
profile PF04113: Gpi16 subunit, GPI transamidase
component
Length = 643
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 603 LRRGSIKHNIICVEDLIPW-RSFTCSEK 683
LR GS+ +C E+L PW + C +K
Sbjct: 169 LRYGSLPREAVCTENLTPWLKLLPCRDK 196
>At3g07140.1 68416.m00850 GPI transamidase component Gpi16 subunit
family protein similar to phosphatidyl inositol glycan
class T (GI:14456615) [Homo sapiens]; contains Pfam
profile PF04113: Gpi16 subunit, GPI transamidase
component
Length = 644
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 603 LRRGSIKHNIICVEDLIPW-RSFTCSEK 683
LR GS+ +C E+L PW + C +K
Sbjct: 169 LRYGSLPREAVCTENLTPWLKLLPCRDK 196
>At5g06740.1 68418.m00762 lectin protein kinase family protein
contains Legume lectins beta-chain signature,
PROSITE:PS00307 and Serine/Threonine protein kinases
active-site signature, PROSITE:PS00108
Length = 652
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 344 IGICHPNPWYQPSFTEVRKVL 406
+ CHPNP +PS V KVL
Sbjct: 586 LACCHPNPNQRPSMKTVLKVL 606
>At4g14310.2 68417.m02205 peroxisomal membrane protein-related
contains weak similarity to Peroxisomal membrane protein
2 (22 kDa peroxisomal membrane protein)
(Swiss-Prot:P42925) [Mus musculus]
Length = 965
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 694 TWNFFSEQVKDLHGMRSSTQIMLCFMEPLLNN 599
+W+F+++ +K LH S+++ + PL NN
Sbjct: 629 SWDFYTKDIKALHIEDGSSRVSRTALAPLPNN 660
>At4g14310.1 68417.m02204 peroxisomal membrane protein-related
contains weak similarity to Peroxisomal membrane protein
2 (22 kDa peroxisomal membrane protein)
(Swiss-Prot:P42925) [Mus musculus]
Length = 1087
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 694 TWNFFSEQVKDLHGMRSSTQIMLCFMEPLLNN 599
+W+F+++ +K LH S+++ + PL NN
Sbjct: 602 SWDFYTKDIKALHIEDGSSRVSRTALAPLPNN 633
>At1g72950.1 68414.m08437 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 379
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 8/49 (16%)
Frame = +1
Query: 481 YRRALHCLGNPNLK-SVREL-VYKRG------FAKLSGQRITNHFQQHC 603
+ +ALH L N N K SVR + ++ RG AK Q I HF+ HC
Sbjct: 192 HMKALHRLLNLNSKKSVRVIGIWARGGNGRSALAKFVYQNICQHFESHC 240
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 421 QSKQLQNFTDF-GETWLIPRIRMTNANLASPGT 326
+ KQL+ + G TW+ P I +N ++ SPGT
Sbjct: 126 ERKQLRTHLIWTGGTWIQPEIEESNKSMFSPGT 158
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,694,891
Number of Sequences: 28952
Number of extensions: 301654
Number of successful extensions: 792
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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