Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30841
         (662 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000155542B Cluster: PREDICTED: similar to hCG1739155...    34   2.7  
UniRef50_Q8IJN5 Cluster: Putative uncharacterized protein; n=1; ...    33   8.1  
UniRef50_O96177 Cluster: Putative uncharacterized protein PFB041...    33   8.1  

>UniRef50_UPI000155542B Cluster: PREDICTED: similar to hCG1739155,
            partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
            similar to hCG1739155, partial - Ornithorhynchus anatinus
          Length = 1146

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +1

Query: 25   ERVRNRIRKPASAAKTPSVTFQVIPSEISPTQWAVYEEMEDLPEGISYKMPIIKGDPQHS 204
            ER+  R+  P+    +        P E  P QW +YEE    P+    K+ +++GD + +
Sbjct: 1072 ERLEKRVIFPSRLGSSILFGSLQAPREGGPVQWVMYEE----PQFRGRKLALVEGDVELA 1127

Query: 205  QKYQDRSTLRI 237
            + +  RS  RI
Sbjct: 1128 EPWGPRSPARI 1138


>UniRef50_Q8IJN5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 257

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 12/42 (28%), Positives = 28/42 (66%)
 Frame = +3

Query: 225 NFKNLRRRRPEDFKNNIKLVQL*DIIILYFYNLDFCKLSNRN 350
           + K +++++ +  +N  KL+ +  I I+Y++NL+F  +S +N
Sbjct: 39  SLKKMKKKKKKKMRNIYKLLIVLSICIIYYFNLNFFSVSAKN 80


>UniRef50_O96177 Cluster: Putative uncharacterized protein PFB0415c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFB0415c - Plasmodium falciparum
           (isolate 3D7)
          Length = 256

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +3

Query: 531 CYCKSLQSNLLKIRDSKTKKRLDSL*QTRN 620
           C CKSL S + K+    TKKR+DS+ Q  N
Sbjct: 224 CACKSLGSEIKKVLKQYTKKRIDSIYQKVN 253


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,872,239
Number of Sequences: 1657284
Number of extensions: 11150839
Number of successful extensions: 27314
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27311
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)