Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30840
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    26   1.0  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    26   1.3  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    24   4.1  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   7.2  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   7.2  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    23   9.5  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 16/107 (14%)
 Frame = +3

Query: 390 ETVPVSAPTSFLSPSVKSY-LELGMGIPGKPGTDYPI----------LGAVRTP--TFTV 530
           +T P +  T+  +P  + Y    G  +   P   YP+             V  P  TF  
Sbjct: 323 QTTPATTTTTTTTPRPRRYPTNAGHKVMNAPKEYYPVGYDKNFDDNFTSKVDLPYTTFNC 382

Query: 531 MKQQ-YPGFFADMENSLSSVGI-TVTSMGR-QASFLCPNGTVFSQGV 662
            +Q+ +PG + D +       +  +T  G    SFLCP  T+F Q V
Sbjct: 383 GEQKHFPGLYGDEDLGCMVFHVCALTDDGLIMKSFLCPESTLFDQTV 429



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 330 RAGSVPVARDPAQELDAPEPETVPVSAPTSFL 425
           +A S+P+   P + +  P PE  PV    S L
Sbjct: 111 KATSLPLGVPPFRPIPKPTPEAEPVRFDPSVL 142


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +3

Query: 519 TFTVMKQQ-YPGFFADMENSLSSVGI-TVTSMGR-QASFLCPNGTVFSQGV 662
           TF   +Q+ +PG + D +       +  +T  G    SFLCP  T+F Q V
Sbjct: 387 TFNCGEQKHFPGLYGDEDLGCMVFHVCALTDDGLIMKSFLCPESTLFDQTV 437



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 330 RAGSVPVARDPAQELDAPEPETVPVSAPTSFL 425
           +A S+P+   P + +  P PE  PV    S L
Sbjct: 116 KATSLPLGVPPFRPIPKPTPEAEPVRFDPSVL 147


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 403 CPRQHLSSVHPS-NRTWNLVWV 465
           CPR  ++S HPS    W++V +
Sbjct: 116 CPRISIASAHPSAEMNWSIVLI 137


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 650 LPRRWLPANWWFNVSN 697
           L ++ L   WWFNV N
Sbjct: 944 LKKQELHIEWWFNVKN 959


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +3

Query: 327 VRAGSVPVARDPAQELDAPEPETVPVSAPTSFLSPSVKSYLELGMGI 467
           + A  +  A D  +   AP P+ +P+ A    +  ++K+YLE  + +
Sbjct: 393 ISADEIQKAADHLKLGKAPGPDGIPIEA----IKAAIKAYLEAFLSV 435


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 676 VRRKPTPWENTVPLGQRNDA*RP 608
           VRR  TPW   + +G+     RP
Sbjct: 289 VRRSCTPWMRPLKMGRNRQKARP 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,327
Number of Sequences: 2352
Number of extensions: 18290
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)