Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30839
         (572 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         25   0.46 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   1.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   5.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   5.6  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -3

Query: 399 EEVRQLLQQHVFVANCRSTLQVLLVELPRKRPQLAWLLKHSHKFR 265
           EE++ LLQ++  +ANC+      LV+ P+   ++   +   H  R
Sbjct: 35  EEIKDLLQKYPPIANCK------LVQAPKLNAEVKRAITQQHSER 73


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 558 PGTRRGFYNNKINY 517
           PG R G YN+K NY
Sbjct: 144 PGQRGGAYNDKSNY 157


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 19  EVVQFRALVTPCMPTCE 69
           EVV+   LV  C  TCE
Sbjct: 299 EVVEIYLLVYACASTCE 315


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 5/41 (12%), Positives = 22/41 (53%)
 Frame = -3

Query: 264  RSLYIYCILCDILSTLFVESEFISNLDGLHEKHIICRCSRC 142
            ++++  C++  +    +++  ++  +  L+  +++C C  C
Sbjct: 889  QTIFALCVVLQLQENDWLQLGYLIFVSTLYTANVVCICHVC 929


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 19  EVVQFRALVTPCMPTCE 69
           EVV+   LV  C  TCE
Sbjct: 299 EVVEIYLLVYACASTCE 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,287
Number of Sequences: 336
Number of extensions: 2572
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)