Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30838
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    25   0.60 
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    25   0.60 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.8  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 621 FQAQFVRITLGVRNRTYLV*RIIKRFDD 538
           F A+ + +T+  + R YL+ R  KRFD+
Sbjct: 92  FGAETIFVTMVFKERLYLILRPGKRFDE 119


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 621 FQAQFVRITLGVRNRTYLV*RIIKRFDD 538
           F A+ + +T+  + R YL+ R  KRFD+
Sbjct: 92  FGAETIFVTMVFKERLYLILRPGKRFDE 119


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 167 FLRTFFSILTASALSSAFNFSGLVFSTLNS 78
           FL  FF+IL    L +A      +  TLNS
Sbjct: 83  FLTYFFNILFRKKLLNAVKILSKIDETLNS 112


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 167 FLRTFFSILTASALSSAFNFSGLVFSTLNS 78
           FL  FF+IL    L +A      +  TLNS
Sbjct: 79  FLTYFFNILFRKKLLNAVKILSKIDETLNS 108


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 606 RTGLGKFLQVLLEVTAKDHLIFS 674
           R G+G++ Q  L V    H+++S
Sbjct: 35  RPGIGRYAQEDLPVDLCTHIVYS 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,698
Number of Sequences: 336
Number of extensions: 2528
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)