BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30838 (706 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U42013-1|AAB06496.1| 415|Caenorhabditis elegans UNC-24 protein. 29 2.4 AF045644-5|AAC02604.1| 415|Caenorhabditis elegans Uncoordinated... 29 2.4 AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 ho... 29 2.4 AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 ho... 29 2.4 AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 28 7.5 AF016417-2|AAB65279.2| 533|Caenorhabditis elegans Hypothetical ... 28 7.5 Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 27 9.9 Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical pr... 27 9.9 Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical p... 27 9.9 >U42013-1|AAB06496.1| 415|Caenorhabditis elegans UNC-24 protein. Length = 415 Score = 29.5 bits (63), Expect = 2.4 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = -2 Query: 183 QERRIVLADVLLDFNSFSAQFCLQFLRARILDLKLV 76 Q+RRI+ A++ + SF+ QF ++ I D+K+V Sbjct: 199 QDRRIISANLKDELGSFTCQFGVEITDVEISDVKIV 234 >AF045644-5|AAC02604.1| 415|Caenorhabditis elegans Uncoordinated protein 24 protein. Length = 415 Score = 29.5 bits (63), Expect = 2.4 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = -2 Query: 183 QERRIVLADVLLDFNSFSAQFCLQFLRARILDLKLV 76 Q+RRI+ A++ + SF+ QF ++ I D+K+V Sbjct: 199 QDRRIISANLKDELGSFTCQFGVEITDVEISDVKIV 234 >AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 homolog protein 1, isoformb protein. Length = 1420 Score = 29.5 bits (63), Expect = 2.4 Identities = 14/53 (26%), Positives = 30/53 (56%) Frame = -2 Query: 162 ADVLLDFNSFSAQFCLQFLRARILDLKLVWVFNERLLKVAHYLFPNSLLHTEV 4 +DV++ F + +Q L+ + +DLK+V + LL+ YL + ++H ++ Sbjct: 1192 SDVII-FMEYCSQGTLERICHGKMDLKMVRQYTNSLLRAVQYLHSHKIIHRDI 1243 >AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 homolog protein 1, isoforma protein. Length = 1418 Score = 29.5 bits (63), Expect = 2.4 Identities = 14/53 (26%), Positives = 30/53 (56%) Frame = -2 Query: 162 ADVLLDFNSFSAQFCLQFLRARILDLKLVWVFNERLLKVAHYLFPNSLLHTEV 4 +DV++ F + +Q L+ + +DLK+V + LL+ YL + ++H ++ Sbjct: 1192 SDVII-FMEYCSQGTLERICHGKMDLKMVRQYTNSLLRAVQYLHSHKIIHRDI 1243 >AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical protein Y51A2D.15 protein. Length = 1222 Score = 27.9 bits (59), Expect = 7.5 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -1 Query: 151 SRF*QLQRSVLPSISQGSYSRP*TR 77 SRF L+R+ PS+ QG+Y+ P R Sbjct: 1187 SRFLSLRRTAKPSLLQGAYTNPNVR 1211 >AF016417-2|AAB65279.2| 533|Caenorhabditis elegans Hypothetical protein F17A9.2 protein. Length = 533 Score = 27.9 bits (59), Expect = 7.5 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = -1 Query: 703 FLGFQKIGNPEKIKWSLA 650 F+G IGNPEK KW A Sbjct: 216 FIGLAAIGNPEKQKWLYA 233 >Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical protein T03F6.2 protein. Length = 510 Score = 27.5 bits (58), Expect = 9.9 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 Query: 88 VENTSPEKLKAELSAEAVKIEKNVRKND 171 VEN PE+ + E + E VK EK R+ D Sbjct: 405 VENEQPEEEEKECTPEVVKKEKKKRRAD 432 >Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical protein ZC168.1 protein. Length = 807 Score = 27.5 bits (58), Expect = 9.9 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +1 Query: 28 RKKIMRDLQQAFVEDPNEFKVENTSPEKLKAELSAEAVKIEKNVRKND 171 +KK DLQ+ ++ KV++ PEKL E+ A + N +ND Sbjct: 215 KKKKSSDLQEELEMAQHDGKVDD-QPEKLSDEIKKWASNLSLNKEEND 261 >Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical protein ZC168.1 protein. Length = 807 Score = 27.5 bits (58), Expect = 9.9 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +1 Query: 28 RKKIMRDLQQAFVEDPNEFKVENTSPEKLKAELSAEAVKIEKNVRKND 171 +KK DLQ+ ++ KV++ PEKL E+ A + N +ND Sbjct: 215 KKKKSSDLQEELEMAQHDGKVDD-QPEKLSDEIKKWASNLSLNKEEND 261 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,703,162 Number of Sequences: 27780 Number of extensions: 252091 Number of successful extensions: 771 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 755 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 771 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1634564590 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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