Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30832
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    99   4e-23
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    27   0.15 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    27   0.15 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        26   0.35 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.4  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   7.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 98.7 bits (235), Expect = 4e-23
 Identities = 56/81 (69%), Positives = 59/81 (72%)
 Frame = +3

Query: 408 GTIAKSGTKAFMEGLQAGADISMIGQFGVWLLLHYLVADRVTVHSKHHDDEQYVWESFCR 587
           GTIAKSGTKAFME LQAGADISMIGQFGV     YLVAD+VTV SK++DDEQYVWES   
Sbjct: 101 GTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVTVVSKNNDDEQYVWES-SA 159

Query: 588 EARFTVPPRQAVKPPLVRGYK 650
              FTV   Q    PL RG K
Sbjct: 160 GGSFTV--TQDRGEPLGRGTK 178



 Score = 92.3 bits (219), Expect = 4e-21
 Identities = 56/103 (54%), Positives = 62/103 (60%)
 Frame = +2

Query: 101 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAKSGMNLSR 280
           MPEE   Q  +VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDAL K       
Sbjct: 1   MPEE--NQNGDVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT 58

Query: 281 IRQNSIVAKSCTSRSFPTRTRALLRSSIPGLV*PRADFVNNLG 409
                   K    +  P +    L     G+   +AD V+NLG
Sbjct: 59  NPSRLDSGKELYIKIIPNKNDGTLTIIDTGIGMTKADLVHNLG 101



 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +3

Query: 300 WQRAVHQDHSQQERGHSYDHRYRDWYD 380
           W R    D SQ+E G  Y     DW D
Sbjct: 286 WTRNA-DDISQEEYGEFYKSLTNDWED 311


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -3

Query: 139 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSAKYQTLVSVL 2
           F  R+LCL F+ +F Y  +++ ++ +   G   ++ Q A Y   +++L
Sbjct: 75  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAML 122


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -3

Query: 139 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSAKYQTLVSVL 2
           F  R+LCL F+ +F Y  +++ ++ +   G   ++ Q A Y   +++L
Sbjct: 31  FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAML 78


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +2

Query: 236 NSSDALAKSGMNLSRIRQNSIVAKSCTSRSFPTRTRALL 352
           N+   L++SG+N      N++ A +   + +PT T  +L
Sbjct: 362 NNIQNLSQSGINYKDTNDNNVSAVTTQHQGYPTNTVTIL 400


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 6/39 (15%)
 Frame = -3

Query: 658 PNFLYPRTKGGFTACL------GGTVKRASLQKDSHTYC 560
           P F+ PR +G    CL       GT+    L  D H  C
Sbjct: 288 PGFVGPRCEGDINECLSNPCSNAGTLDCVQLVNDYHCNC 326


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/37 (21%), Positives = 20/37 (54%)
 Frame = -2

Query: 488 ELSNHADVGTCLKTLHESFSTRFRDGSPNCSQNRPLV 378
           ++   +D    +K   + ++   ++G+PN S+  PL+
Sbjct: 450 DIEEGSDEDIAVKRFVKLWTNFAKNGNPNPSEENPLI 486


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 528 VTVHSKHHDDEQYVWES 578
           + VHS  H+D++  W +
Sbjct: 253 IAVHSITHNDDERFWSN 269


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 629 GLHRLSGRNCETSLPAEGFP 570
           G  R S +N     PA+GFP
Sbjct: 241 GYQRHSKQNVALLCPAQGFP 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,805
Number of Sequences: 336
Number of extensions: 4073
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)