Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30832
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   5.4  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   5.4  
Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor pr...    23   9.4  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 121  CLHFFRHFLYCFLFNSHKMTRGFLTHVFQS 32
            C   F HF Y F F+S      F   +F S
Sbjct: 945  CFRLFNHFYYLFDFDS--SLNSFRNRIFSS 972


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 627 ASPLVWAEL*NEPPCRRIPTRIARRHGV 544
           A+P VW E  N   CRR+  R+ R+  +
Sbjct: 810 AAP-VWHEALNTRECRRLLERVQRKSAI 836


>Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 259 IRYESLTDPSKLDSGKELY 315
           I +E   DP+  ++GK+LY
Sbjct: 131 ISWEDTVDPAACNAGKDLY 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,115
Number of Sequences: 2352
Number of extensions: 17157
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)