Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30832
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 89 2e-18
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 65 4e-11
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 52 5e-07
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 52 5e-07
AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock pr... 52 5e-07
Z75527-5|CAA99776.1| 340|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF125951-2|AAD14691.1| 643|Caenorhabditis elegans Hypothetical ... 30 1.9
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 29 4.3
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 28 5.7
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 28 5.7
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 89.4 bits (212), Expect = 2e-18
Identities = 49/81 (60%), Positives = 55/81 (67%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQAGADISMIGQFGVWLLLHYLVADRVTVHSKHHDDEQYVWESFCR 587
GTIAKSGTKAFME LQAGADISMIGQFGV +LVAD+V V SK++DD+ Y WES
Sbjct: 96 GTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWES-SA 154
Query: 588 EARFTVPPRQAVKPPLVRGYK 650
F V P P + RG K
Sbjct: 155 GGSFVVRPFN--DPEVTRGTK 173
Score = 85.4 bits (202), Expect = 4e-17
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +2
Query: 137 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAKSGMNLSRIRQNSIVAKSCT 316
ETFAFQAEIAQLMSLIINTFYSNKEI+LRELISN+SDAL K K
Sbjct: 6 ETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELF 65
Query: 317 SRSFPTRTRALLRSSIPGLV*PRADFVNNLG 409
+ P + L G+ +AD VNNLG
Sbjct: 66 IKITPNKEEKTLTIMDTGIGMTKADLVNNLG 96
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 65.3 bits (152), Expect = 4e-11
Identities = 38/94 (40%), Positives = 53/94 (56%)
Frame = +2
Query: 128 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAKSGMNLSRIRQNSIVAK 307
++ E FQAE+ ++M LIIN+ Y NKEIFLRELISN+SDAL K + + +
Sbjct: 59 SKAEKHEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLSLTDPEQLRETE 118
Query: 308 SCTSRSFPTRTRALLRSSIPGLV*PRADFVNNLG 409
+ + R LL + G+ R D +NNLG
Sbjct: 119 EMSVKIKADRENRLLHITDTGVGMTRQDLINNLG 152
Score = 62.5 bits (145), Expect = 3e-10
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQAGADIS-----MIGQFGVWLLLHYLVADRVTVHSKHHDDEQYVW 572
GTIA+SGT F+ L A S +IGQFGV +LVADRV V +K++DD+QY+W
Sbjct: 152 GTIARSGTSEFLSKLMDTATSSDQQQDLIGQFGVGFYAAFLVADRVVVTTKNNDDDQYIW 211
Query: 573 ESFCREARFTV 605
ES A FT+
Sbjct: 212 ES--DSASFTI 220
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +1
Query: 256 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKGRFCEQFGEPSRN 423
KIR SLTDP +L +E+ +KI ++ L I DTG+GMT+ G +R+
Sbjct: 102 KIRLLSLTDPEQLRETEEMSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARS 157
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +2
Query: 101 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAK 259
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL K
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEK 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQAGADISMIGQFGVWLLLHYLVADRVTVHSK 545
GTIAKSG+K F+E + A+ ++IGQFGV ++VAD V V ++
Sbjct: 130 GTIAKSGSKDFIENNKENAE-AVIGQFGVGFYSAFMVADSVVVTTR 174
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 316 IKIIPNKNEGTLTIIDTGIGMTK 384
I+I NK++ T+T DTGIGM +
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNR 122
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +2
Query: 101 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAK 259
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL K
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEK 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQAGADISMIGQFGVWLLLHYLVADRVTVHSK 545
GTIAKSG+K F+E + A+ ++IGQFGV ++VAD V V ++
Sbjct: 130 GTIAKSGSKDFIENNKENAE-AVIGQFGVGFYSAFMVADSVVVTTR 174
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 316 IKIIPNKNEGTLTIIDTGIGMTK 384
I+I NK++ T+T DTGIGM +
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNR 122
>AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock
protein 75 protein.
Length = 222
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +2
Query: 101 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAK 259
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL K
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEK 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQAGADISMIGQFGVWLLLHYLVADRVTVHSK 545
GTIAKSG+K F+E + A+ ++IGQFGV ++VAD V V ++
Sbjct: 130 GTIAKSGSKDFIENNKENAE-AVIGQFGVGFYSAFMVADSVVVTTR 174
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 316 IKIIPNKNEGTLTIIDTGIGMTK 384
I+I NK++ T+T DTGIGM +
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNR 122
>Z75527-5|CAA99776.1| 340|Caenorhabditis elegans Hypothetical
protein C15C8.5 protein.
Length = 340
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 655 NFLYPRTKGGFTACLGGTVKRASLQKDSHTYCSSSWCL 542
N + P + G C G R + Q DSH +C +CL
Sbjct: 211 NEMIPEIETGHVRCYMGKDFRNTSQVDSHEFCDGDFCL 248
>AF125951-2|AAD14691.1| 643|Caenorhabditis elegans Hypothetical
protein D2063.2 protein.
Length = 643
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 362 SMIVRVPSFLLGMILMYSSLPLSSFDGSVRDSYLILLKRPM 240
SM R+ FL+GM+ S +F GS R Y+ILL P+
Sbjct: 195 SMFARIWQFLIGMLTFMLSNNSETFSGS-RLKYVILLAMPI 234
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 683 KSLFGRERTKFFVPSDQRGLHRLSGRNCETSLPAEGFPH 567
K+L G+ R K+ + + HRL NC+ +L GF H
Sbjct: 646 KALLGKIRWKYMIIDEG---HRLKNHNCKLTLMLNGFFH 681
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 683 KSLFGRERTKFFVPSDQRGLHRLSGRNCETSLPAEGFPH 567
K+L G+ R K+ + + HRL NC+ +L GF H
Sbjct: 646 KALLGKIRWKYMIIDEG---HRLKNHNCKLTLMLNGFFH 681
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 683 KSLFGRERTKFFVPSDQRGLHRLSGRNCETSLPAEGFPH 567
K+L G+ R K+ + + HRL NC+ +L GF H
Sbjct: 646 KALLGKIRWKYMIIDEG---HRLKNHNCKLTLMLNGFFH 681
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 315 HQDHSQQERGHSYDHRYRD 371
H DH GHS+DH D
Sbjct: 376 HDDHGHDSHGHSHDHNEHD 394
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 315 HQDHSQQERGHSYDHRYRD 371
H DH GHS+DH D
Sbjct: 394 HDDHGHDSHGHSHDHNEHD 412
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,323,466
Number of Sequences: 27780
Number of extensions: 388494
Number of successful extensions: 1115
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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