Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30832
(708 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 95 5e-20
At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl... 91 7e-19
At5g56010.1 68418.m06989 heat shock protein, putative strong sim... 91 7e-19
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl... 91 7e-19
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 80 1e-15
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 80 1e-15
At3g07770.1 68416.m00947 heat shock protein-related strong simil... 66 3e-11
At2g04030.2 68415.m00372 heat shock protein, putative strong sim... 60 1e-09
At2g04030.1 68415.m00371 heat shock protein, putative strong sim... 60 1e-09
At5g24080.1 68418.m02828 protein kinase family protein contains ... 28 5.3
At5g61730.1 68418.m07746 ABC transporter family protein contains... 28 7.0
At5g61690.1 68418.m07740 ABC transporter family protein ABC tran... 28 7.0
At3g47730.1 68416.m05200 ABC transporter family protein AbcA, Di... 28 7.0
At4g16670.1 68417.m02518 expressed protein 27 9.2
At3g52370.1 68416.m05756 beta-Ig-H3 domain-containing protein / ... 27 9.2
At1g52670.1 68414.m05947 biotin/lipoyl attachment domain-contain... 27 9.2
At1g26830.1 68414.m03270 cullin, putative similar to Cullin homo... 27 9.2
>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
shock protein 83 (HSP83) nearly identical to SP|P27323
Heat shock protein 81-1 (HSP81-1) (Heat shock protein
83) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 705
Score = 94.7 bits (225), Expect = 5e-20
Identities = 51/81 (62%), Positives = 57/81 (70%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQAGADISMIGQFGVWLLLHYLVADRVTVHSKHHDDEQYVWESFCR 587
GTIA+SGTK FME LQAGAD+SMIGQFGV YLVA++V V +KH+DDEQYVWES
Sbjct: 100 GTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQA- 158
Query: 588 EARFTVPPRQAVKPPLVRGYK 650
FTV R PL RG K
Sbjct: 159 GGSFTV-TRDVDGEPLGRGTK 178
Score = 87.8 bits (208), Expect = 6e-18
Identities = 51/98 (52%), Positives = 59/98 (60%)
Frame = +2
Query: 116 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAKSGMNLSRIRQNS 295
+ Q A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDAL K +
Sbjct: 3 DVQMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKL 62
Query: 296 IVAKSCTSRSFPTRTRALLRSSIPGLV*PRADFVNNLG 409
R P ++ L G+ +AD VNNLG
Sbjct: 63 DGQPELFIRLVPDKSNKTLSIIDSGIGMTKADLVNNLG 100
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +1
Query: 256 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKGRFCEQFGEPSRN 423
KIR+ESLTD SKLD EL+I+++P+K+ TL+IID+GIGMTK G +R+
Sbjct: 50 KIRFESLTDKSKLDGQPELFIRLVPDKSNKTLSIIDSGIGMTKADLVNNLGTIARS 105
>At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly
identical to SP|P55737 Heat shock protein 81-2 (HSP81-2)
{Arabidopsis thaliana}
Length = 699
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/57 (73%), Positives = 47/57 (82%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQAGADISMIGQFGVWLLLHYLVADRVTVHSKHHDDEQYVWES 578
GTIA+SGTK FME L AGAD+SMIGQFGV YLVAD+V V +KH+DDEQYVWES
Sbjct: 95 GTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVADKVVVTTKHNDDEQYVWES 151
Score = 85.4 bits (202), Expect = 3e-17
Identities = 50/94 (53%), Positives = 56/94 (59%)
Frame = +2
Query: 128 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAKSGMNLSRIRQNSIVAK 307
A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDAL K +
Sbjct: 2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQP 61
Query: 308 SCTSRSFPTRTRALLRSSIPGLV*PRADFVNNLG 409
P +T L G+ +AD VNNLG
Sbjct: 62 ELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLG 95
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = +1
Query: 256 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKGRFCEQFGEPSRN 423
KIR+ESLTD SKLD EL+I IIP+K TLTIID+GIGMTK G +R+
Sbjct: 45 KIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARS 100
>At5g56010.1 68418.m06989 heat shock protein, putative strong
similarity to SP|P55737 Heat shock protein 81-2
(HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 699
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/57 (73%), Positives = 47/57 (82%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQAGADISMIGQFGVWLLLHYLVADRVTVHSKHHDDEQYVWES 578
GTIA+SGTK FME L AGAD+SMIGQFGV YLVAD+V V +KH+DDEQYVWES
Sbjct: 95 GTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVADKVVVTTKHNDDEQYVWES 151
Score = 85.4 bits (202), Expect = 3e-17
Identities = 50/94 (53%), Positives = 56/94 (59%)
Frame = +2
Query: 128 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAKSGMNLSRIRQNSIVAK 307
A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDAL K +
Sbjct: 2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQP 61
Query: 308 SCTSRSFPTRTRALLRSSIPGLV*PRADFVNNLG 409
P +T L G+ +AD VNNLG
Sbjct: 62 ELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLG 95
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = +1
Query: 256 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKGRFCEQFGEPSRN 423
KIR+ESLTD SKLD EL+I IIP+K TLTIID+GIGMTK G +R+
Sbjct: 45 KIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARS 100
>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
identical to heat shock protein hsp81.4 [Arabidopsis
thaliana] GI:1906828; contains Pfam profiles PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein, PF00183: Hsp90 protein
Length = 699
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/57 (73%), Positives = 47/57 (82%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQAGADISMIGQFGVWLLLHYLVADRVTVHSKHHDDEQYVWES 578
GTIA+SGTK FME L AGAD+SMIGQFGV YLVAD+V V +KH+DDEQYVWES
Sbjct: 95 GTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVADKVVVTTKHNDDEQYVWES 151
Score = 85.4 bits (202), Expect = 3e-17
Identities = 50/94 (53%), Positives = 56/94 (59%)
Frame = +2
Query: 128 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAKSGMNLSRIRQNSIVAK 307
A+ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDAL K +
Sbjct: 2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQP 61
Query: 308 SCTSRSFPTRTRALLRSSIPGLV*PRADFVNNLG 409
P +T L G+ +AD VNNLG
Sbjct: 62 ELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLG 95
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = +1
Query: 256 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKGRFCEQFGEPSRN 423
KIR+ESLTD SKLD EL+I IIP+K TLTIID+GIGMTK G +R+
Sbjct: 45 KIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARS 100
>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 80.2 bits (189), Expect = 1e-15
Identities = 42/79 (53%), Positives = 51/79 (64%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQAGADISMIGQFGVWLLLHYLVADRVTVHSKHHDDEQYVWESFCR 587
GTIAKSGT AF+E +Q+ D+++IGQFGV YLVAD + V SKH+DD QYVWES
Sbjct: 169 GTIAKSGTSAFVEKMQSSGDLNLIGQFGVGFYSAYLVADYIEVISKHNDDSQYVWESKA- 227
Query: 588 EARFTVPPRQAVKPPLVRG 644
+F V PL RG
Sbjct: 228 NGKFAV-SEDTWNEPLGRG 245
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +2
Query: 116 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAK 259
+T + E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDAL K
Sbjct: 70 KTLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDK 117
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 256 KIRYESLTDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKGRFCEQFG 408
KIR+ +LTD L G +L I+I +K + L+I D GIGMTK + G
Sbjct: 117 KIRFLALTDKDVLGEGDTAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLG 169
>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
protein, putative nearly identical to SHEPHERD
[Arabidopsis thaliana] GI:19570872; contains Pfam
profiles PF02518: ATPase, histidine kinase-, DNA gyrase
B-, and HSP90-like domain protein, PF00183: Hsp90
protein
Length = 823
Score = 80.2 bits (189), Expect = 1e-15
Identities = 42/79 (53%), Positives = 51/79 (64%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQAGADISMIGQFGVWLLLHYLVADRVTVHSKHHDDEQYVWESFCR 587
GTIAKSGT AF+E +Q+ D+++IGQFGV YLVAD + V SKH+DD QYVWES
Sbjct: 169 GTIAKSGTSAFVEKMQSSGDLNLIGQFGVGFYSAYLVADYIEVISKHNDDSQYVWESKA- 227
Query: 588 EARFTVPPRQAVKPPLVRG 644
+F V PL RG
Sbjct: 228 NGKFAV-SEDTWNEPLGRG 245
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +2
Query: 116 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAK 259
+T + E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDAL K
Sbjct: 70 KTLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDK 117
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 256 KIRYESLTDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKGRFCEQFG 408
KIR+ +LTD L G +L I+I +K + L+I D GIGMTK + G
Sbjct: 117 KIRFLALTDKDVLGEGDTAKLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLG 169
>At3g07770.1 68416.m00947 heat shock protein-related strong
similarity to heat-shock protein [Secale cereale]
GI:556673; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 803
Score = 65.7 bits (153), Expect = 3e-11
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +2
Query: 125 PAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAK 259
P E F +QAE+++LM LI+N+ YSNKE+FLRELISN+SDAL K
Sbjct: 91 PPPAEKFEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDK 135
Score = 63.7 bits (148), Expect = 1e-10
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQ----AGADISMIGQFGVWLLLHYLVADRVTVHSKH-HDDEQYVW 572
GTIA+SGT FM+ L+ AG D ++IGQFGV +LVADRV V +K D+QYVW
Sbjct: 185 GTIAQSGTAKFMKALKDSKDAGGDNNLIGQFGVGFYSAFLVADRVIVSTKSPKSDKQYVW 244
Query: 573 ESFCREARFTV 605
E + FT+
Sbjct: 245 EGEANSSSFTI 255
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 256 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKGRFCEQFG 408
K+RY S+T+P +L I+I +K G +T+ D+GIGMT+ + G
Sbjct: 135 KLRYLSVTNPELSKDAPDLDIRIYADKENGIITLTDSGIGMTRQELVDCLG 185
>At2g04030.2 68415.m00372 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 777
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/51 (50%), Positives = 40/51 (78%)
Frame = +2
Query: 107 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAK 259
E+ T+ E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDAL K
Sbjct: 67 EKETTEEGSGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDK 117
Score = 57.6 bits (133), Expect = 8e-09
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQA----GADISMIGQFGVWLLLHYLVADRVTVHSKH-HDDEQYVW 572
GTIA+SGT F++ L+ GAD +IGQFGV +LVA++V V +K D+QYVW
Sbjct: 167 GTIAQSGTSKFLKALKENKDLGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVW 226
Query: 573 ESFCREARFTV 605
ES + + +
Sbjct: 227 ESVADSSSYLI 237
Score = 54.0 bits (124), Expect = 9e-08
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +1
Query: 256 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKGRFCEQFG 408
K+R+ S+T+PS L G +L I+I P+ + GT+TI DTGIGMTK + G
Sbjct: 117 KLRFLSVTEPSLLGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLG 167
>At2g04030.1 68415.m00371 heat shock protein, putative strong
similarity to heat shock protein [Arabidopsis thaliana]
GI:1906830; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 780
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/51 (50%), Positives = 40/51 (78%)
Frame = +2
Query: 107 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAK 259
E+ T+ E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDAL K
Sbjct: 67 EKETTEEGSGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDK 117
Score = 57.6 bits (133), Expect = 8e-09
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Frame = +3
Query: 408 GTIAKSGTKAFMEGLQA----GADISMIGQFGVWLLLHYLVADRVTVHSKH-HDDEQYVW 572
GTIA+SGT F++ L+ GAD +IGQFGV +LVA++V V +K D+QYVW
Sbjct: 167 GTIAQSGTSKFLKALKENKDLGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVW 226
Query: 573 ESFCREARFTV 605
ES + + +
Sbjct: 227 ESVADSSSYLI 237
Score = 54.0 bits (124), Expect = 9e-08
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +1
Query: 256 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKGRFCEQFG 408
K+R+ S+T+PS L G +L I+I P+ + GT+TI DTGIGMTK + G
Sbjct: 117 KLRFLSVTEPSLLGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLG 167
>At5g24080.1 68418.m02828 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 470
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = -2
Query: 395 QNRPLVIPIPVSMIVRVPSFLLGMILMYSSLPLSSFDGSVRDSYLILLKRPMNW 234
+ + LVIPI V M+V V LLGM+L Y+ + + ++S LIL P+++
Sbjct: 68 RQKVLVIPIVVGMLVLVA--LLGMLLYYNLDRKRTLKRAAKNS-LILCDSPVSF 118
>At5g61730.1 68418.m07746 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter
Length = 940
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 663 KDQIFCTLGPKGA 625
KDQ+FC LGP GA
Sbjct: 548 KDQLFCLLGPNGA 560
>At5g61690.1 68418.m07740 ABC transporter family protein ABC
transport protein, Dictyostelium discoideum, PIR:T18288
Length = 954
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 663 KDQIFCTLGPKGA 625
KDQ+FC LGP GA
Sbjct: 534 KDQLFCLLGPNGA 546
>At3g47730.1 68416.m05200 ABC transporter family protein AbcA,
Dictyostelium discoideum, DDU66526
Length = 983
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 663 KDQIFCTLGPKGA 625
KDQ+FC LGP GA
Sbjct: 556 KDQLFCLLGPNGA 568
>At4g16670.1 68417.m02518 expressed protein
Length = 429
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 694 ISAQSPFLDVKGPNFLYPRTKGGFTACLGGTVKRASLQKDSHTYCSSSWC 545
+SA +DV+GP L T TA G R L K++ + S C
Sbjct: 223 VSAVRSAVDVRGPGDLLTLTAAAATALRGEAALRVRLPKEAKNSAAISPC 272
>At3g52370.1 68416.m05756 beta-Ig-H3 domain-containing protein /
fasciclin domain-containing protein weak similarity to
osteoblast specific factor 2 [Homo sapiens] GI:393319;
contains Pfam profile PF02469: Fasciclin domain;
supporting cDNA gi|26450295|dbj|AK117608.1|
Length = 436
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 232 FQFIGRFSKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKGRFCEQ 402
+ + RF KIRY+SL P K+++ +E + +G+ + D I T GR Q
Sbjct: 332 YNSVRRFGKIRYDSLRFPHKVEA-QEADGSVKFGHGDGSAYLFDPDI-YTDGRISVQ 386
>At1g52670.1 68414.m05947 biotin/lipoyl attachment domain-containing
protein similar to SP|Q06881 Biotin carboxyl carrier
protein of acetyl-CoA carboxylase (BCCP) {Anabaena sp.};
contains Pfam profile PF00364: Biotin-requiring enzyme
Length = 274
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +2
Query: 125 PAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALAKSGMNLSRIRQNSIVA 304
PAE E A + + S ++NT K + LIS +D+ + + L VA
Sbjct: 63 PAETEAIADVKDSDETKSTVVNTHLMPKSSEVEALISEITDSSSIAEFELKLGGFRLYVA 122
Query: 305 KSCTSRSFP 331
+ T S P
Sbjct: 123 RKLTDESSP 131
>At1g26830.1 68414.m03270 cullin, putative similar to Cullin homolog
3 (CUL-3) SP:Q13618, GI:3639052 from [Homo sapiens];
contains Pfam profile PF00888: Cullin family
Length = 732
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 303 QRAVHQDHSQQERGHSYDHRYRDWYD 380
+RA+HQ ++Q G S++ YR+ Y+
Sbjct: 33 ERAIHQIYNQDASGLSFEELYRNAYN 58
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,633,533
Number of Sequences: 28952
Number of extensions: 376838
Number of successful extensions: 1143
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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