Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30831
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    26   0.27 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    26   0.27 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.9  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    23   3.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   5.8  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +3

Query: 411 VYIVCYAIGLSTVPYVTIGEMFPTNVKLYAFLQAHIYTGVAMFAVQNLFRV 563
           VY +C  IGL+T+     GE+   +   Y +   +I T   + +V +LFR+
Sbjct: 28  VYAICKLIGLNTLRIGRKGEL-KQHKSDYFYFSFYI-TSYTLLSVYSLFRI 76


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +3

Query: 411 VYIVCYAIGLSTVPYVTIGEMFPTNVKLYAFLQAHIYTGVAMFAVQNLFRV 563
           VY +C  IGL+T+     GE+   +   Y +   +I T   + +V +LFR+
Sbjct: 28  VYAICKLIGLNTLRIGRKGEL-KQHKSDYFYFSFYI-TSYTLLSVYSLFRI 76


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 387 WILLVALIVYIVCYAIGLST--VPYVTIGEMFPTNVKLYAFLQAHI 518
           W+ L+ +    +CYA G  +  V   ++   FP N+ +   L   I
Sbjct: 133 WVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSVPVLLSGLI 178


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 387 WILLVALIVYIVCYAIGLST--VPYVTIGEMFPTNVKLYAFLQAHI 518
           W+ L+ +    +CYA G  +  V   ++   FP N+ +   L   I
Sbjct: 366 WVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSVPVLLSGLI 411


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 387 WILLVALIVYIVCYAIGLST--VPYVTIGEMFPTNVKLYAFLQAHI 518
           W+ L+ +    +CYA G  +  V   ++   FP N+ +   L   I
Sbjct: 366 WVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSVPVLLSGLI 411


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 110 IHNLYSTVPPGLLYCQMEP*KTKPVKVSNPIKNLS 214
           + N+  TV     +C+M+P +T  + V   IKN +
Sbjct: 545 LKNIDLTVLESGAFCKMQPLRTLKIGVYRNIKNFN 579


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 214 IIGCVQVATCILSVSSWTE 270
           II C+  ATC+ SVS  +E
Sbjct: 5   IILCLVYATCVYSVSEISE 23


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -1

Query: 632 TSPRNEKNSEPPEHCVNSISLFDNPEEILHCKHSDA 525
           T  R++        C+N +S+F     IL+C ++ A
Sbjct: 306 TPDRSKFRPSSLRFCLNILSIFTYVPMILYCVYTTA 341


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -1

Query: 632 TSPRNEKNSEPPEHCVNSISLFDNPEEILHCKHSDA 525
           T  R++        C+N +S+F     IL+C ++ A
Sbjct: 31  TPDRSKFRPSSLRFCLNILSIFTYVPMILYCVYTTA 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,745
Number of Sequences: 336
Number of extensions: 4233
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)