Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30831
(725 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 26 0.42
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 26 0.42
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 24 1.7
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 24 1.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.9
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 5.1
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 5.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.1
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 22 5.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.0
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.8 bits (54), Expect = 0.42
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 175 KTRKSIEPYQESIIIGCVQVATCIL 249
KTRK E + ES IG TCI+
Sbjct: 694 KTRKIPENFNESKFIGFTMYTTCII 718
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.8 bits (54), Expect = 0.42
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 175 KTRKSIEPYQESIIIGCVQVATCIL 249
KTRK E + ES IG TCI+
Sbjct: 784 KTRKIPENFNESKFIGFTMYTTCII 808
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 115 QFIFNCTTGPTILPNGTLEDKTRKSIEP 198
QF+ T+GP ++ N + + S+EP
Sbjct: 177 QFLITNTSGPGVVSNPMIAELETLSVEP 204
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 650 CLPENQKGKFL 682
C+PENQ +FL
Sbjct: 564 CMPENQDSQFL 574
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 115 QFIFNCTTGPTILPNGTLEDKTRKSIEP 198
QF+ T+GP ++ N + + S+EP
Sbjct: 177 QFLITNTSGPGVVSNPMIAELETLSVEP 204
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 650 CLPENQKGKFL 682
C+PENQ +FL
Sbjct: 564 CMPENQDSQFL 574
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 3.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 178 TRKSIEPYQESIIIGCVQVATCIL 249
TRK E + ES IG TC++
Sbjct: 837 TRKIPEAFNESKHIGFTMYTTCVI 860
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 503 ERVQLDISREHLPDCNIRH 447
E QLDIS + DC I +
Sbjct: 177 ELPQLDISNNYTTDCTIEY 195
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 400 WPLSFTSCATPSAYQPCRMLQSGRCSR 480
W +S +C+ P P +SGR R
Sbjct: 385 WQMSCVACSPPPRQTPPSRKESGRRRR 411
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 5.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 232 VATCILSVSSWT 267
V TC+L + SWT
Sbjct: 164 VQTCVLKLGSWT 175
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 22.2 bits (45), Expect = 5.1
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 626 PRNEKNSEPPE--HCVNSISLFDNPEEILHCKHSDACIYVCLQERVQLDISREHLPDC 459
P E ++ PE + +N + L NP + + + ++C +ERV + R+ DC
Sbjct: 132 PSPEWDTVTPEAKNLINQM-LTVNPSKRITASEALKHPWICQRERVASVVHRQETVDC 188
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 9.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 375 VRLACSYRKSRNTFRLFHSLVLRPKSI 295
VRLAC + N+ + VL+ +SI
Sbjct: 281 VRLACMFDAQTNSMICLNGQVLKRESI 307
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,148
Number of Sequences: 438
Number of extensions: 4872
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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