Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30823
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   1.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   5.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   5.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   5.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   5.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   5.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   5.6  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   9.7  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.7  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +1

Query: 388 KGFSERRKVSAEHRNCKNNPNKEIITKSWASRGRRRKQEITRAYRKAAQKV 540
           + FS  +++S  +   KN+  KE I +S    G RR+Q  TR  RK +  V
Sbjct: 555 QAFSSLKELS--NHMVKNSHYKEHIMRSITESGGRRRQ--TREKRKKSLPV 601


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -1

Query: 533 CAAFLYALVISCFRRRPLDAQDFVIIS 453
           C+  LYA++++C++  P +   F  +S
Sbjct: 719 CSPDLYAVMLNCWKECPKNRPTFTELS 745


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = -1

Query: 125 SLNSCLHTPGEVCPLFSPSCKTENISCAP 39
           S ++ L    ++ P  +P+C  ++  C+P
Sbjct: 124 SSSNILQNLADITPNVTPNCDVKSSVCSP 152



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +2

Query: 404 EGRSQPSTETAKTIRTKRLLQNPGRQEDGDENKRS 508
           + R+ PS +  + +  +    N   Q+DGD+ + S
Sbjct: 158 DSRTSPSGQHLQELGLRLEDANSDEQDDGDDGQGS 192


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = -1

Query: 125 SLNSCLHTPGEVCPLFSPSCKTENISCAP 39
           S ++ L    ++ P  +P+C  ++  C+P
Sbjct: 124 SSSNILQNLADITPNVTPNCDVKSSVCSP 152



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +2

Query: 404 EGRSQPSTETAKTIRTKRLLQNPGRQEDGDENKRS 508
           + R+ PS +  + +  +    N   Q+DGD+ + S
Sbjct: 158 DSRTSPSGQHLQELGLRLEDANSDEQDDGDDGQGS 192


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 348 DAIRAYKEALELDEGFQRAKEGLSRAQKLQKQSE 449
           D  + Y   L + +   +   G +RAQ++QK+SE
Sbjct: 5   DLAQLYGNELHIKQ-ISKWLRGSARAQEIQKRSE 37


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 348 DAIRAYKEALELDEGFQRAKEGLSRAQKLQKQSE 449
           D  + Y   L + +   +   G +RAQ++QK+SE
Sbjct: 5   DLAQLYGNELHIKQ-ISKWLRGSARAQEIQKRSE 37


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 348 DAIRAYKEALELDEGFQRAKEGLSRAQKLQKQSE 449
           D  + Y   L + +   +   G +RAQ++QK+SE
Sbjct: 5   DLAQLYGNELHIKQ-ISKWLRGSARAQEIQKRSE 37


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = -1

Query: 125 SLNSCLHTPGEVCPLFSPSCKTENISCAP 39
           S ++ L    ++ P  +P+C  ++  C+P
Sbjct: 124 SSSNILQNLADITPNVTPNCDVKSSVCSP 152



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +2

Query: 404 EGRSQPSTETAKTIRTKRLLQNPGRQEDGDENKRS 508
           + R+ PS +  + +  +    N   Q+DGD+ + S
Sbjct: 158 DSRTSPSGQHLQELGLRLEDANSDEQDDGDDGQGS 192


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 100 LEKFVHFFHLLVKRK 56
           LEK  HF H L +R+
Sbjct: 21  LEKEFHFNHYLTRRR 35


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 100 LEKFVHFFHLLVKRK 56
           LEK  HF H L +R+
Sbjct: 172 LEKEFHFNHYLTRRR 186


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 100 LEKFVHFFHLLVKRK 56
           LEK  HF H L +R+
Sbjct: 231 LEKEFHFNHYLTRRR 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,146
Number of Sequences: 336
Number of extensions: 1937
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)