BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30823 (566 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_01_0713 - 5332145-5332351,5332675-5332893,5334347-5334559,533... 38 0.006 01_07_0380 + 43181564-43181639,43182053-43182218,43182494-431826... 38 0.006 10_08_0435 + 17905728-17905901,17906608-17906931,17907205-179073... 32 0.28 04_04_1563 - 34445832-34445891,34445981-34446097,34447363-344474... 31 0.64 02_05_0969 + 33165396-33165935,33166352-33166883,33166988-331672... 30 1.5 11_03_0079 + 9669666-9669728,9670779-9672545 29 2.0 07_03_0849 + 21997758-21998423 29 2.6 02_05_0183 + 26537676-26537752,26538481-26538649,26538736-265389... 29 2.6 05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,278... 29 3.4 08_01_0438 + 3852221-3853207,3853544-3854757,3855258-3855330,385... 28 4.5 06_01_0806 - 6048042-6048138,6048461-6048550,6049362-6049425,604... 28 4.5 02_02_0353 + 9276316-9276518,9276915-9277314 28 4.5 02_01_0478 - 3442222-3442227,3442777-3442848,3442966-3443137,344... 28 4.5 01_04_0109 + 16112581-16112934 28 4.5 11_01_0537 + 4252546-4252969,4253739-4253785 28 6.0 07_01_0775 + 5976883-5978109 28 6.0 03_02_0760 + 10960381-10960461,10960740-10961003,10961334-109616... 28 6.0 03_01_0466 - 3605909-3606073,3606689-3607004,3607184-3607689 28 6.0 02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850... 28 6.0 >02_01_0713 - 5332145-5332351,5332675-5332893,5334347-5334559, 5334637-5334730,5334860-5335020,5335114-5335315, 5335619-5335784,5336208-5336286 Length = 446 Score = 37.9 bits (84), Expect = 0.006 Identities = 19/42 (45%), Positives = 29/42 (69%) Frame = +3 Query: 369 EALELDEGFQRAKEGLSRAQKLQKQSEQRDYYKILGVKRTAT 494 +AL D G +E L RA+K K S+++D+YKILG+ +TA+ Sbjct: 301 DALTQDMGI---REALMRAEKQLKLSKRKDWYKILGISKTAS 339 >01_07_0380 + 43181564-43181639,43182053-43182218,43182494-43182695, 43182789-43182949,43183079-43183172,43183250-43183462, 43184917-43185135,43185458-43185661 Length = 444 Score = 37.9 bits (84), Expect = 0.006 Identities = 19/42 (45%), Positives = 29/42 (69%) Frame = +3 Query: 369 EALELDEGFQRAKEGLSRAQKLQKQSEQRDYYKILGVKRTAT 494 +AL D G +E L RA+K K S+++D+YKILG+ +TA+ Sbjct: 300 DALTQDMGI---REALMRAEKQLKLSKRKDWYKILGISKTAS 338 >10_08_0435 + 17905728-17905901,17906608-17906931,17907205-17907321, 17908418-17908597,17909064-17909190,17909327-17909440, 17909794-17909909 Length = 383 Score = 32.3 bits (70), Expect = 0.28 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = +3 Query: 336 EMYDDAIRAYKEALELDEGFQRAKEGLSRAQKLQKQSEQRDYYKILG 476 E YD+AI K+ +ELD ++AK L R + L + ++ +++G Sbjct: 300 EHYDEAIADMKKIIELDPSNEQAKRSLFRLEPLAAEKREKMKEEMIG 346 >04_04_1563 - 34445832-34445891,34445981-34446097,34447363-34447450, 34447626-34447675,34447848-34448285 Length = 250 Score = 31.1 bits (67), Expect = 0.64 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +3 Query: 336 EMYDDAIRAYKEALELDEGFQRAKEGLSRAQKLQKQSEQRD 458 E Y A AY +AL+LD +R K +R QKL+++ D Sbjct: 205 EEYRAAEDAYADALDLDPSIRRTKSFRARVQKLREKVANAD 245 >02_05_0969 + 33165396-33165935,33166352-33166883,33166988-33167242, 33167515-33167606,33167745-33167942,33168049-33168240, 33168341-33168562,33168858-33169024,33169117-33169210, 33169308-33169364,33169459-33169587,33169681-33169752, 33170180-33170293,33170419-33170580,33170666-33170794, 33171057-33171158,33171266-33171342,33171470-33171592, 33171666-33172227 Length = 1272 Score = 29.9 bits (64), Expect = 1.5 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +3 Query: 402 AKEGLSRAQKLQKQSEQRDYYKILGVKRTATKTRDHK 512 A++G+S K+ K+ E + L KRT TK R K Sbjct: 1233 ARKGMSSVMKVTKKLEGKSAASALAAKRTQTKNRKQK 1269 >11_03_0079 + 9669666-9669728,9670779-9672545 Length = 609 Score = 29.5 bits (63), Expect = 2.0 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Frame = +1 Query: 157 RCPARRDRSHSGDLRGPKWLCSCAVKEELYSEAWGTAAARWSCAATRDCCA-TAPTRCSD 333 R PARR++ S + C C + + WG+ W + DC +AP CS Sbjct: 9 RGPARRNQVPSPERARLIPRCGCRLSSK---HVWGSTGTPWHMLSALDCLLFSAPQSCSL 65 Query: 334 SRCTTTLSARTRRL 375 + T T S RL Sbjct: 66 AH-TWTASVMHNRL 78 >07_03_0849 + 21997758-21998423 Length = 221 Score = 29.1 bits (62), Expect = 2.6 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +1 Query: 202 GPKWLCSCAVKEELYSEA-WGTAAARWSCAATRDCCATAPTRCSDSRCTTTLSARTRRLW 378 G K S A +++Y A W +++ WS + + + S S TT +R+R L Sbjct: 54 GSKKYSSAAALDDVYDAAEWSSSSVPWSSTSALSLDSARSSSSSSSTTTTAPCSRSRSLS 113 Query: 379 S 381 S Sbjct: 114 S 114 >02_05_0183 + 26537676-26537752,26538481-26538649,26538736-26538910, 26539008-26539137,26540425-26540558,26540629-26540771, 26540894-26541092,26541183-26541514 Length = 452 Score = 29.1 bits (62), Expect = 2.6 Identities = 11/37 (29%), Positives = 23/37 (62%) Frame = +3 Query: 429 KLQKQSEQRDYYKILGVKRTATKTRDHKGVQEGSAES 539 ++ K+S YY++LGV +TAT+ K ++ + ++ Sbjct: 36 RMPKKSNNTKYYEVLGVSKTATQDELKKAYRKAAIKN 72 >05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891, 2787114-2787176,2787299-2787397,2787726-2787884, 2788420-2788491,2788567-2788699,2788813-2788877, 2789016-2789091,2789236-2789337,2789524-2789716, 2790576-2790654,2792939-2793007,2793261-2793311, 2793680-2793742,2793926-2794041,2794263-2794347, 2794898-2794957,2795594-2795639,2796011-2796084, 2796350-2796400,2796474-2796674,2796747-2796791, 2797063-2797156,2797226-2797371,2797510-2797739, 2798136-2798196,2798290-2798347,2799020-2799513 Length = 1151 Score = 28.7 bits (61), Expect = 3.4 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +3 Query: 339 MYDDAIRAYKEALELDEGFQRAKEGLSRAQKLQK 440 M DA+ Y+ AL ++ + AK+GL R +K K Sbjct: 935 MLSDALSHYQSALRINPHNEAAKKGLERLEKQMK 968 >08_01_0438 + 3852221-3853207,3853544-3854757,3855258-3855330, 3856715-3856843,3857060-3857103,3857186-3857265, 3857342-3857396,3857712-3857919 Length = 929 Score = 28.3 bits (60), Expect = 4.5 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%) Frame = +3 Query: 336 EMYDDAIRAYKEALELDEGFQRAKEGLSRA-QKLQKQSEQRDYYKILGVKRTATKTRDHK 512 +++ DAI+ KE E + AKE L +A ++ + RD + KR K+ K Sbjct: 663 DLHCDAIKCAKEGSASSELYSVAKEALHKALDEVVTLRKIRDQQNLQSCKRPIKKSAKGK 722 Query: 513 GVQEGSAESGTRDS 554 + S TR S Sbjct: 723 DSDHSTIISSTRFS 736 >06_01_0806 - 6048042-6048138,6048461-6048550,6049362-6049425, 6049504-6049552,6050403-6050459,6050953-6051024, 6051912-6052003,6052542-6052614,6052686-6052748, 6052837-6052901,6053803-6053890,6053974-6054015, 6054097-6054188,6054601-6054688,6055134-6055225, 6055368-6055419 Length = 391 Score = 28.3 bits (60), Expect = 4.5 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +3 Query: 435 QKQSEQRDYYKILGVKRTATK 497 Q S ++DYYKILGV + A++ Sbjct: 19 QHSSPEKDYYKILGVPKDASQ 39 >02_02_0353 + 9276316-9276518,9276915-9277314 Length = 200 Score = 28.3 bits (60), Expect = 4.5 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 479 QEDGDENKRSQGRTGRQRRKWHPGQLPR 562 Q +G + RS+ R R+RR+W P PR Sbjct: 149 QAEGLVDDRSRSRHRRRRRRWCPSSSPR 176 >02_01_0478 - 3442222-3442227,3442777-3442848,3442966-3443137, 3443388-3443500,3443771-3443908,3444016-3444221, 3444317-3444388,3444484-3444532,3444635-3444714, 3444817-3445132,3445242-3445415,3445513-3446139, 3446235-3446297,3446399-3446470,3446602-3446664, 3446741-3446872,3447779-3447889,3449273-3449371, 3450117-3450194 Length = 880 Score = 28.3 bits (60), Expect = 4.5 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%) Frame = -1 Query: 125 SLNSCLH-----TPGEVCPLFSPSCKTENISCAP 39 SLN C TPG VCP S SC +E+I P Sbjct: 615 SLNCCCEGQAFCTPGTVCPPNSKSCGSESIKEPP 648 >01_04_0109 + 16112581-16112934 Length = 117 Score = 28.3 bits (60), Expect = 4.5 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 406 RKVSAEHRNCKNNPNKEIITKSWASRGRRRKQEITRAYRKAAQK 537 R +A H+ NN + TK + RRR+ + A RKAA + Sbjct: 22 RATAATHQRTANNHQSDARTKPTTAGSRRRQGRGSSAARKAAAR 65 >11_01_0537 + 4252546-4252969,4253739-4253785 Length = 156 Score = 27.9 bits (59), Expect = 6.0 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +2 Query: 425 TETAKTIRTKRLLQNPGRQEDGDENKRSQGRTGRQRRKWHPGQLP 559 T TA T + +R R+ GD +R +G GR+R H LP Sbjct: 56 TATATTKKRRRSSGRRWRRCSGDLRRRRRGGRGRRRDGDHDDDLP 100 >07_01_0775 + 5976883-5978109 Length = 408 Score = 27.9 bits (59), Expect = 6.0 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +1 Query: 301 CCATAPTRCSDSRCTTTLSA 360 CC P+ +D+ CTTTL A Sbjct: 295 CCDVPPSPAADAACTTTLPA 314 >03_02_0760 + 10960381-10960461,10960740-10961003,10961334-10961619, 10961637-10962394 Length = 462 Score = 27.9 bits (59), Expect = 6.0 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = +2 Query: 416 QPSTETAKTIRTKRLLQNPGRQEDGDENKRSQGRTGRQRRKWHPGQLPRG 565 Q E A+ + +RLL+ G E +R R +QRR+ P +PRG Sbjct: 35 QSRAEVAERNKRRRLLEVKAELRRGREEER---RGEKQRREEEPTMVPRG 81 >03_01_0466 - 3605909-3606073,3606689-3607004,3607184-3607689 Length = 328 Score = 27.9 bits (59), Expect = 6.0 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = +1 Query: 424 HRNCKNNPNKEIITKSWASRGRRRKQEITRAYRKAAQKVA 543 HR P+ I + WA+ RRR Q + ++ + ++ A Sbjct: 18 HRRPLFLPSTSIASSRWATAARRRSQAVAHQFQASTRRAA 57 >02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835, 8509204-8509553,8509631-8509729,8509811-8510105, 8510200-8510405,8510498-8510689,8510766-8511163, 8511258-8511444,8511473-8511528,8511800-8511872, 8512012-8512872,8514353-8514778 Length = 1134 Score = 27.9 bits (59), Expect = 6.0 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +1 Query: 190 GDLRGPKWLCSCAVKEELYSEAWGTAAARWSCAATRDCC 306 GD+ WL A +E + +WG+AA W D C Sbjct: 612 GDMASWMWLLLLADWDEAGTFSWGSAALAWLYRQLCDAC 650 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,867,246 Number of Sequences: 37544 Number of extensions: 241875 Number of successful extensions: 991 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 964 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 991 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1305140760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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