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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30823
         (566 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0713 - 5332145-5332351,5332675-5332893,5334347-5334559,533...    38   0.006
01_07_0380 + 43181564-43181639,43182053-43182218,43182494-431826...    38   0.006
10_08_0435 + 17905728-17905901,17906608-17906931,17907205-179073...    32   0.28 
04_04_1563 - 34445832-34445891,34445981-34446097,34447363-344474...    31   0.64 
02_05_0969 + 33165396-33165935,33166352-33166883,33166988-331672...    30   1.5  
11_03_0079 + 9669666-9669728,9670779-9672545                           29   2.0  
07_03_0849 + 21997758-21998423                                         29   2.6  
02_05_0183 + 26537676-26537752,26538481-26538649,26538736-265389...    29   2.6  
05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,278...    29   3.4  
08_01_0438 + 3852221-3853207,3853544-3854757,3855258-3855330,385...    28   4.5  
06_01_0806 - 6048042-6048138,6048461-6048550,6049362-6049425,604...    28   4.5  
02_02_0353 + 9276316-9276518,9276915-9277314                           28   4.5  
02_01_0478 - 3442222-3442227,3442777-3442848,3442966-3443137,344...    28   4.5  
01_04_0109 + 16112581-16112934                                         28   4.5  
11_01_0537 + 4252546-4252969,4253739-4253785                           28   6.0  
07_01_0775 + 5976883-5978109                                           28   6.0  
03_02_0760 + 10960381-10960461,10960740-10961003,10961334-109616...    28   6.0  
03_01_0466 - 3605909-3606073,3606689-3607004,3607184-3607689           28   6.0  
02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850...    28   6.0  

>02_01_0713 -
           5332145-5332351,5332675-5332893,5334347-5334559,
           5334637-5334730,5334860-5335020,5335114-5335315,
           5335619-5335784,5336208-5336286
          Length = 446

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 19/42 (45%), Positives = 29/42 (69%)
 Frame = +3

Query: 369 EALELDEGFQRAKEGLSRAQKLQKQSEQRDYYKILGVKRTAT 494
           +AL  D G    +E L RA+K  K S+++D+YKILG+ +TA+
Sbjct: 301 DALTQDMGI---REALMRAEKQLKLSKRKDWYKILGISKTAS 339


>01_07_0380 +
           43181564-43181639,43182053-43182218,43182494-43182695,
           43182789-43182949,43183079-43183172,43183250-43183462,
           43184917-43185135,43185458-43185661
          Length = 444

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 19/42 (45%), Positives = 29/42 (69%)
 Frame = +3

Query: 369 EALELDEGFQRAKEGLSRAQKLQKQSEQRDYYKILGVKRTAT 494
           +AL  D G    +E L RA+K  K S+++D+YKILG+ +TA+
Sbjct: 300 DALTQDMGI---REALMRAEKQLKLSKRKDWYKILGISKTAS 338


>10_08_0435 +
           17905728-17905901,17906608-17906931,17907205-17907321,
           17908418-17908597,17909064-17909190,17909327-17909440,
           17909794-17909909
          Length = 383

 Score = 32.3 bits (70), Expect = 0.28
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +3

Query: 336 EMYDDAIRAYKEALELDEGFQRAKEGLSRAQKLQKQSEQRDYYKILG 476
           E YD+AI   K+ +ELD   ++AK  L R + L  +  ++   +++G
Sbjct: 300 EHYDEAIADMKKIIELDPSNEQAKRSLFRLEPLAAEKREKMKEEMIG 346


>04_04_1563 -
           34445832-34445891,34445981-34446097,34447363-34447450,
           34447626-34447675,34447848-34448285
          Length = 250

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3

Query: 336 EMYDDAIRAYKEALELDEGFQRAKEGLSRAQKLQKQSEQRD 458
           E Y  A  AY +AL+LD   +R K   +R QKL+++    D
Sbjct: 205 EEYRAAEDAYADALDLDPSIRRTKSFRARVQKLREKVANAD 245


>02_05_0969 + 33165396-33165935,33166352-33166883,33166988-33167242,
            33167515-33167606,33167745-33167942,33168049-33168240,
            33168341-33168562,33168858-33169024,33169117-33169210,
            33169308-33169364,33169459-33169587,33169681-33169752,
            33170180-33170293,33170419-33170580,33170666-33170794,
            33171057-33171158,33171266-33171342,33171470-33171592,
            33171666-33172227
          Length = 1272

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 402  AKEGLSRAQKLQKQSEQRDYYKILGVKRTATKTRDHK 512
            A++G+S   K+ K+ E +     L  KRT TK R  K
Sbjct: 1233 ARKGMSSVMKVTKKLEGKSAASALAAKRTQTKNRKQK 1269


>11_03_0079 + 9669666-9669728,9670779-9672545
          Length = 609

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = +1

Query: 157 RCPARRDRSHSGDLRGPKWLCSCAVKEELYSEAWGTAAARWSCAATRDCCA-TAPTRCSD 333
           R PARR++  S +       C C +  +     WG+    W   +  DC   +AP  CS 
Sbjct: 9   RGPARRNQVPSPERARLIPRCGCRLSSK---HVWGSTGTPWHMLSALDCLLFSAPQSCSL 65

Query: 334 SRCTTTLSARTRRL 375
           +  T T S    RL
Sbjct: 66  AH-TWTASVMHNRL 78


>07_03_0849 + 21997758-21998423
          Length = 221

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +1

Query: 202 GPKWLCSCAVKEELYSEA-WGTAAARWSCAATRDCCATAPTRCSDSRCTTTLSARTRRLW 378
           G K   S A  +++Y  A W +++  WS  +     +   +  S S  TT   +R+R L 
Sbjct: 54  GSKKYSSAAALDDVYDAAEWSSSSVPWSSTSALSLDSARSSSSSSSTTTTAPCSRSRSLS 113

Query: 379 S 381
           S
Sbjct: 114 S 114


>02_05_0183 +
           26537676-26537752,26538481-26538649,26538736-26538910,
           26539008-26539137,26540425-26540558,26540629-26540771,
           26540894-26541092,26541183-26541514
          Length = 452

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +3

Query: 429 KLQKQSEQRDYYKILGVKRTATKTRDHKGVQEGSAES 539
           ++ K+S    YY++LGV +TAT+    K  ++ + ++
Sbjct: 36  RMPKKSNNTKYYEVLGVSKTATQDELKKAYRKAAIKN 72


>05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,
            2787114-2787176,2787299-2787397,2787726-2787884,
            2788420-2788491,2788567-2788699,2788813-2788877,
            2789016-2789091,2789236-2789337,2789524-2789716,
            2790576-2790654,2792939-2793007,2793261-2793311,
            2793680-2793742,2793926-2794041,2794263-2794347,
            2794898-2794957,2795594-2795639,2796011-2796084,
            2796350-2796400,2796474-2796674,2796747-2796791,
            2797063-2797156,2797226-2797371,2797510-2797739,
            2798136-2798196,2798290-2798347,2799020-2799513
          Length = 1151

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 339  MYDDAIRAYKEALELDEGFQRAKEGLSRAQKLQK 440
            M  DA+  Y+ AL ++   + AK+GL R +K  K
Sbjct: 935  MLSDALSHYQSALRINPHNEAAKKGLERLEKQMK 968


>08_01_0438 +
           3852221-3853207,3853544-3854757,3855258-3855330,
           3856715-3856843,3857060-3857103,3857186-3857265,
           3857342-3857396,3857712-3857919
          Length = 929

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +3

Query: 336 EMYDDAIRAYKEALELDEGFQRAKEGLSRA-QKLQKQSEQRDYYKILGVKRTATKTRDHK 512
           +++ DAI+  KE     E +  AKE L +A  ++    + RD   +   KR   K+   K
Sbjct: 663 DLHCDAIKCAKEGSASSELYSVAKEALHKALDEVVTLRKIRDQQNLQSCKRPIKKSAKGK 722

Query: 513 GVQEGSAESGTRDS 554
                +  S TR S
Sbjct: 723 DSDHSTIISSTRFS 736


>06_01_0806 -
           6048042-6048138,6048461-6048550,6049362-6049425,
           6049504-6049552,6050403-6050459,6050953-6051024,
           6051912-6052003,6052542-6052614,6052686-6052748,
           6052837-6052901,6053803-6053890,6053974-6054015,
           6054097-6054188,6054601-6054688,6055134-6055225,
           6055368-6055419
          Length = 391

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 435 QKQSEQRDYYKILGVKRTATK 497
           Q  S ++DYYKILGV + A++
Sbjct: 19  QHSSPEKDYYKILGVPKDASQ 39


>02_02_0353 + 9276316-9276518,9276915-9277314
          Length = 200

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 479 QEDGDENKRSQGRTGRQRRKWHPGQLPR 562
           Q +G  + RS+ R  R+RR+W P   PR
Sbjct: 149 QAEGLVDDRSRSRHRRRRRRWCPSSSPR 176


>02_01_0478 -
           3442222-3442227,3442777-3442848,3442966-3443137,
           3443388-3443500,3443771-3443908,3444016-3444221,
           3444317-3444388,3444484-3444532,3444635-3444714,
           3444817-3445132,3445242-3445415,3445513-3446139,
           3446235-3446297,3446399-3446470,3446602-3446664,
           3446741-3446872,3447779-3447889,3449273-3449371,
           3450117-3450194
          Length = 880

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
 Frame = -1

Query: 125 SLNSCLH-----TPGEVCPLFSPSCKTENISCAP 39
           SLN C       TPG VCP  S SC +E+I   P
Sbjct: 615 SLNCCCEGQAFCTPGTVCPPNSKSCGSESIKEPP 648


>01_04_0109 + 16112581-16112934
          Length = 117

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 406 RKVSAEHRNCKNNPNKEIITKSWASRGRRRKQEITRAYRKAAQK 537
           R  +A H+   NN   +  TK   +  RRR+   + A RKAA +
Sbjct: 22  RATAATHQRTANNHQSDARTKPTTAGSRRRQGRGSSAARKAAAR 65


>11_01_0537 + 4252546-4252969,4253739-4253785
          Length = 156

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 425 TETAKTIRTKRLLQNPGRQEDGDENKRSQGRTGRQRRKWHPGQLP 559
           T TA T + +R      R+  GD  +R +G  GR+R   H   LP
Sbjct: 56  TATATTKKRRRSSGRRWRRCSGDLRRRRRGGRGRRRDGDHDDDLP 100


>07_01_0775 + 5976883-5978109
          Length = 408

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 301 CCATAPTRCSDSRCTTTLSA 360
           CC   P+  +D+ CTTTL A
Sbjct: 295 CCDVPPSPAADAACTTTLPA 314


>03_02_0760 +
           10960381-10960461,10960740-10961003,10961334-10961619,
           10961637-10962394
          Length = 462

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +2

Query: 416 QPSTETAKTIRTKRLLQNPGRQEDGDENKRSQGRTGRQRRKWHPGQLPRG 565
           Q   E A+  + +RLL+       G E +R   R  +QRR+  P  +PRG
Sbjct: 35  QSRAEVAERNKRRRLLEVKAELRRGREEER---RGEKQRREEEPTMVPRG 81


>03_01_0466 - 3605909-3606073,3606689-3607004,3607184-3607689
          Length = 328

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +1

Query: 424 HRNCKNNPNKEIITKSWASRGRRRKQEITRAYRKAAQKVA 543
           HR     P+  I +  WA+  RRR Q +   ++ + ++ A
Sbjct: 18  HRRPLFLPSTSIASSRWATAARRRSQAVAHQFQASTRRAA 57


>02_02_0279 -
           8507603-8507620,8508040-8508060,8508613-8508835,
           8509204-8509553,8509631-8509729,8509811-8510105,
           8510200-8510405,8510498-8510689,8510766-8511163,
           8511258-8511444,8511473-8511528,8511800-8511872,
           8512012-8512872,8514353-8514778
          Length = 1134

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 190 GDLRGPKWLCSCAVKEELYSEAWGTAAARWSCAATRDCC 306
           GD+    WL   A  +E  + +WG+AA  W      D C
Sbjct: 612 GDMASWMWLLLLADWDEAGTFSWGSAALAWLYRQLCDAC 650


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,867,246
Number of Sequences: 37544
Number of extensions: 241875
Number of successful extensions: 991
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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