Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30823
         (566 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   1.3  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    24   3.0  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   4.0  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            23   5.3  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   9.2  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   9.2  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +1

Query: 112 QEFSERFCRMHEEC 153
           +E++E FCR++++C
Sbjct: 521 EEYTEEFCRLYQDC 534


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +1

Query: 178 RSHSGDLRGPKWLCSCAVKEELYSEAWGTAAARWSCAATR 297
           ++  G    P     C +  E+  +  GTA A WS + T+
Sbjct: 19  QADGGSFLAPSGSNYCPIPLEVLEQENGTAPADWSASCTQ 58


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 19/67 (28%), Positives = 24/67 (35%)
 Frame = +1

Query: 157 RCPARRDRSHSGDLRGPKWLCSCAVKEELYSEAWGTAAARWSCAATRDCCATAPTRCSDS 336
           R PAR     +GD   P    S +    LY           + AA      TA T    S
Sbjct: 785 RSPARCPADTNGDAGTPGNPLSSSTSSSLYPNGSIGGVNSLAAAAAATLIPTATTNVRPS 844

Query: 337 RCTTTLS 357
             TT++S
Sbjct: 845 FTTTSIS 851


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 304 CATAPTRCSDSRCTTTLSARTRRL 375
           C T PT C+++ C  T +   + L
Sbjct: 8   CFTNPTECNNTECIDTTTYAKKNL 31


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 428 ETAKTIRTKRLLQNPGRQEDGDENKRSQGRTGRQRR 535
           +  K +   + LQ   +Q+   + ++ QG+TG+  R
Sbjct: 641 QAIKALLATQQLQQQQQQQQQQQQQQQQGQTGQADR 676


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +2

Query: 413  SQPSTETAKTIRTKRLLQNPGRQEDGDENKRSQGRTGRQRRKWHPGQLPR 562
            S  +TE  +  R    LQ   R+ DG+     QGR  R R      +L R
Sbjct: 1119 SPRTTEMRRRRRNYMQLQYRRRRRDGELGDVPQGRQRRGRIPTSAAELER 1168


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,801
Number of Sequences: 2352
Number of extensions: 8413
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)