BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30823 (566 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 63 2e-10 AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 47 1e-05 Z81058-8|CAB02923.1| 442|Caenorhabditis elegans Hypothetical pr... 31 0.76 U00043-6|AAC77507.1| 487|Caenorhabditis elegans Hypothetical pr... 29 1.8 U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain (pr... 29 2.3 Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 28 5.4 U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small glutamine... 28 5.4 AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 28 5.4 AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 28 5.4 U50313-2|AAY86230.1| 883|Caenorhabditis elegans Inositol 1,4,5-... 27 7.1 U50313-1|AAY86229.1| 923|Caenorhabditis elegans Inositol 1,4,5-... 27 7.1 AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 27 7.1 AF016674-1|AAB66132.1| 160|Caenorhabditis elegans Hypothetical ... 27 7.1 AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 9.4 >U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (prokaryotic heat shockprotein) protein 7 protein. Length = 491 Score = 62.9 bits (146), Expect = 2e-10 Identities = 29/54 (53%), Positives = 40/54 (74%) Frame = +3 Query: 336 EMYDDAIRAYKEALELDEGFQRAKEGLSRAQKLQKQSEQRDYYKILGVKRTATK 497 E YD AI Y++A E++ + AKEGL A++L+ Q+ +RDYYKILGVKR A+K Sbjct: 339 EDYDSAIEDYQKATEVNPDHREAKEGLEHAKRLKTQAGKRDYYKILGVKRNASK 392 Score = 31.1 bits (67), Expect = 0.58 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = +2 Query: 2 ALKEIRECLKLDPEHXXXXXXXXXXXXXDKLLQECEDKSSARDFAGCMK 148 +L IRECLKL+P+H K L+ + K D+ C++ Sbjct: 227 SLNVIRECLKLNPDHKSCYPFYKKLRKVVKSLESMKKKVENSDWMACLE 275 Score = 29.5 bits (63), Expect = 1.8 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = +1 Query: 409 KVSAEH-RNCKNNPNKEIITKSWASRGRRRKQEITRAYRKAAQKVAP 546 K EH + K K K + K+EIT+AYRK AQK P Sbjct: 362 KEGLEHAKRLKTQAGKRDYYKILGVKRNASKREITKAYRKLAQKWHP 408 >AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (prokaryotic heat shockprotein) protein 28 protein. Length = 494 Score = 46.8 bits (106), Expect = 1e-05 Identities = 23/54 (42%), Positives = 33/54 (61%) Frame = +3 Query: 336 EMYDDAIRAYKEALELDEGFQRAKEGLSRAQKLQKQSEQRDYYKILGVKRTATK 497 E YD AI Y++A E D + G +A++ ++ +RDYYKILGV+R A K Sbjct: 340 EEYDMAIADYEKAEEWDSSNDAVRTGKDQAKRAKELVGKRDYYKILGVRRNANK 393 Score = 28.3 bits (60), Expect = 4.1 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +1 Query: 481 RGRRRKQEITRAYRKAAQKVAP 546 R K+EIT+AYRK AQK P Sbjct: 388 RRNANKREITKAYRKMAQKWHP 409 Score = 27.5 bits (58), Expect = 7.1 Identities = 13/50 (26%), Positives = 23/50 (46%) Frame = +2 Query: 2 ALKEIRECLKLDPEHXXXXXXXXXXXXXDKLLQECEDKSSARDFAGCMKS 151 +L IRECLKL+P+H K L + +++ C+++ Sbjct: 228 SLGSIRECLKLNPDHKKCYTSYKSLKKIVKSLDSMKASIEQQEWTKCLET 277 >Z81058-8|CAB02923.1| 442|Caenorhabditis elegans Hypothetical protein F11E6.8 protein. Length = 442 Score = 30.7 bits (66), Expect = 0.76 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -1 Query: 551 VPGATFCAAFLYALVISCFRRRPLDAQDFVIIS 453 +P T C +Y L+ C+R P D DFV +S Sbjct: 364 LPQPTHCPDIIYDLMQCCWRSTPEDRPDFVFLS 396 >U00043-6|AAC77507.1| 487|Caenorhabditis elegans Hypothetical protein T26A5.4 protein. Length = 487 Score = 29.5 bits (63), Expect = 1.8 Identities = 18/66 (27%), Positives = 35/66 (53%) Frame = +3 Query: 339 MYDDAIRAYKEALELDEGFQRAKEGLSRAQKLQKQSEQRDYYKILGVKRTATKTRDHKGV 518 ++DD+ + ++ +EL GF L R +K Q ++ D ++++ KR+AT D + Sbjct: 392 LFDDSEQLSRQIIELSRGFPNNCNELIRLKK-NTQEQKFDSWEVMW-KRSATSGADFRVP 449 Query: 519 QEGSAE 536 G A+ Sbjct: 450 DNGFAK 455 >U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain (prokaryotic heat shockprotein) protein 4 protein. Length = 274 Score = 29.1 bits (62), Expect = 2.3 Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Frame = +3 Query: 387 EGFQRAKEG--LSRAQKLQKQSEQRDYYKILGVKRTAT 494 +GF+ + G + +A+ K+ QR +Y++LGV+ TAT Sbjct: 3 QGFRWSPHGFWVCQARFFNKKIRQRTHYEVLGVESTAT 40 >Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical protein R03E1.3 protein. Length = 502 Score = 27.9 bits (59), Expect = 5.4 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +3 Query: 411 GLSRAQKLQKQSEQRDYYKILGVKRTATKTR 503 GLS+ Q+L+KQ + YK+ VK AT T+ Sbjct: 23 GLSKEQQLEKQLMVKYNYKVRPVKSEATVTQ 53 >U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small glutamine-rich tetratricorepeat protein protein 1 protein. Length = 337 Score = 27.9 bits (59), Expect = 5.4 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 342 YDDAIRAYKEALELDEGFQRAKEGLSRAQKLQKQSE 449 Y+ A AYK+ALEL+ + K L A+ K+ E Sbjct: 188 YEHAAEAYKKALELEPNQESYKNNLKIAEDKLKELE 223 >AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical protein Y51H4A.12 protein. Length = 1677 Score = 27.9 bits (59), Expect = 5.4 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +1 Query: 397 SERRKVSAEHRNCKNNPNKEIITKSWASRGRRRKQEITRAYRKAAQK 537 SERR+ +AE ++ +E A RRR +E R R A K Sbjct: 1122 SERRRFAAERHRAMDHKKREAEEARRADEERRRLEEEVRRERAAKTK 1168 >AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical protein Y80D3A.8 protein. Length = 1293 Score = 27.9 bits (59), Expect = 5.4 Identities = 14/64 (21%), Positives = 31/64 (48%) Frame = +3 Query: 366 KEALELDEGFQRAKEGLSRAQKLQKQSEQRDYYKILGVKRTATKTRDHKGVQEGSAESGT 545 KE +E R KE S A++ QK+ + + ++ K + + KG+++ + Sbjct: 933 KEKIEQLNAKVREKEERSEARRKQKEKDDEEEKRLYEEKEKEQRKKQIKGIEKWTKSMDF 992 Query: 546 RDSY 557 +D++ Sbjct: 993 KDNH 996 >U50313-2|AAY86230.1| 883|Caenorhabditis elegans Inositol 1,4,5-trisphosphate receptorinteracting protein protein 1, isoform b protein. Length = 883 Score = 27.5 bits (58), Expect = 7.1 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = -3 Query: 153 ALFMHPAKSLAELLSSHSWRSLST 82 ALF+HP + ++LL+S W + T Sbjct: 580 ALFLHPLRHGSDLLASADWMKIKT 603 >U50313-1|AAY86229.1| 923|Caenorhabditis elegans Inositol 1,4,5-trisphosphate receptorinteracting protein protein 1, isoform a protein. Length = 923 Score = 27.5 bits (58), Expect = 7.1 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = -3 Query: 153 ALFMHPAKSLAELLSSHSWRSLST 82 ALF+HP + ++LL+S W + T Sbjct: 580 ALFLHPLRHGSDLLASADWMKIKT 603 >AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical protein F15E6.1 protein. Length = 1655 Score = 27.5 bits (58), Expect = 7.1 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +1 Query: 397 SERRKVSAEHRNCKNNPNKEIITKSWASRGRRRKQEITRAYRKAAQK 537 SERR+ +AE ++ +E A RRR +E R R A K Sbjct: 1114 SERRRFAAERHRAMDHKKQEAEEARRADEERRRLEEEVRRERAAKTK 1160 >AF016674-1|AAB66132.1| 160|Caenorhabditis elegans Hypothetical protein C03H5.4 protein. Length = 160 Score = 27.5 bits (58), Expect = 7.1 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = -1 Query: 152 HSSCILQNLSLN-SCLHTPGEVCPLFSPSCKTENISC 45 H C ++L L +C TP E P++S C+ + I C Sbjct: 64 HDKCY-EDLDLKKTCWTTPFEYFPIYSWKCQNQTIHC 99 >AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical protein F59E12.9 protein. Length = 1621 Score = 27.1 bits (57), Expect = 9.4 Identities = 11/46 (23%), Positives = 26/46 (56%) Frame = +2 Query: 401 SEGRSQPSTETAKTIRTKRLLQNPGRQEDGDENKRSQGRTGRQRRK 538 S+ S + ++K R+KR L+N ++ GD+ K + + +++ + Sbjct: 86 SDSDSADFSSSSKRKRSKRALENDSDEDVGDDGKEEEMKKKKEKEE 131 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,697,804 Number of Sequences: 27780 Number of extensions: 200084 Number of successful extensions: 811 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 780 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 811 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1176726318 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -