BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30822 (762 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 29 4.8 U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 29 4.8 Z67881-1|CAA91797.1| 192|Caenorhabditis elegans Hypothetical pr... 28 6.3 Z68159-3|CAD89733.1| 351|Caenorhabditis elegans Hypothetical pr... 28 8.3 Z68159-2|CAD89732.1| 354|Caenorhabditis elegans Hypothetical pr... 28 8.3 Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical pr... 28 8.3 Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical pr... 28 8.3 >U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to transporter of divalentcations protein 1, isoform a protein. Length = 428 Score = 28.7 bits (61), Expect = 4.8 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +2 Query: 26 EACIKQASGADILPPIVSGRITSIGFAFTYGTVEIRAK 139 + CI +AS D + + SGR + F GTV++R + Sbjct: 265 DRCISEASHIDGVLELKSGRFWQLDFNSLVGTVDVRVR 302 >U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to transporter of divalentcations protein 1, isoform b protein. Length = 446 Score = 28.7 bits (61), Expect = 4.8 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +2 Query: 26 EACIKQASGADILPPIVSGRITSIGFAFTYGTVEIRAK 139 + CI +AS D + + SGR + F GTV++R + Sbjct: 283 DRCISEASHIDGVLELKSGRFWQLDFNSLVGTVDVRVR 320 >Z67881-1|CAA91797.1| 192|Caenorhabditis elegans Hypothetical protein C52G5.2 protein. Length = 192 Score = 28.3 bits (60), Expect = 6.3 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -2 Query: 608 PVAELRYASCRHA*RYVEVVIEMAPICEP 522 PV +LR RH RY+E VIEM P Sbjct: 148 PVEDLRRTFIRHDDRYMEQVIEMRTATHP 176 >Z68159-3|CAD89733.1| 351|Caenorhabditis elegans Hypothetical protein C33D9.3b protein. Length = 351 Score = 27.9 bits (59), Expect = 8.3 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = -2 Query: 719 PPVGNPNGTMCPPEMYGCPSEALFFS 642 P V P+ T PP + GCP F S Sbjct: 56 PTVSPPSDTSSPPNVIGCPETTSFSS 81 >Z68159-2|CAD89732.1| 354|Caenorhabditis elegans Hypothetical protein C33D9.3a protein. Length = 354 Score = 27.9 bits (59), Expect = 8.3 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = -2 Query: 719 PPVGNPNGTMCPPEMYGCPSEALFFS 642 P V P+ T PP + GCP F S Sbjct: 56 PTVSPPSDTSSPPNVIGCPETTSFSS 81 >Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical protein E02H1.2 protein. Length = 394 Score = 27.9 bits (59), Expect = 8.3 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -1 Query: 417 IRCPLNGICMKTVAPRRAVSASFCGE 340 IRCPL+ + K R +SAS C + Sbjct: 54 IRCPLSAVSSKMDTTTRNISASICSD 79 >Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical protein E02H1.2 protein. Length = 394 Score = 27.9 bits (59), Expect = 8.3 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -1 Query: 417 IRCPLNGICMKTVAPRRAVSASFCGE 340 IRCPL+ + K R +SAS C + Sbjct: 54 IRCPLSAVSSKMDTTTRNISASICSD 79 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,888,010 Number of Sequences: 27780 Number of extensions: 426115 Number of successful extensions: 1166 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1091 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1160 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1819579054 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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