Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30822
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to tran...    29   4.8  
U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to tran...    29   4.8  
Z67881-1|CAA91797.1|  192|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z68159-3|CAD89733.1|  351|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z68159-2|CAD89732.1|  354|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z47075-7|CAA87384.1|  394|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z36752-8|CAA85330.1|  394|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform a
           protein.
          Length = 428

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 26  EACIKQASGADILPPIVSGRITSIGFAFTYGTVEIRAK 139
           + CI +AS  D +  + SGR   + F    GTV++R +
Sbjct: 265 DRCISEASHIDGVLELKSGRFWQLDFNSLVGTVDVRVR 302


>U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform b
           protein.
          Length = 446

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 26  EACIKQASGADILPPIVSGRITSIGFAFTYGTVEIRAK 139
           + CI +AS  D +  + SGR   + F    GTV++R +
Sbjct: 283 DRCISEASHIDGVLELKSGRFWQLDFNSLVGTVDVRVR 320


>Z67881-1|CAA91797.1|  192|Caenorhabditis elegans Hypothetical
           protein C52G5.2 protein.
          Length = 192

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 608 PVAELRYASCRHA*RYVEVVIEMAPICEP 522
           PV +LR    RH  RY+E VIEM     P
Sbjct: 148 PVEDLRRTFIRHDDRYMEQVIEMRTATHP 176


>Z68159-3|CAD89733.1|  351|Caenorhabditis elegans Hypothetical
           protein C33D9.3b protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 719 PPVGNPNGTMCPPEMYGCPSEALFFS 642
           P V  P+ T  PP + GCP    F S
Sbjct: 56  PTVSPPSDTSSPPNVIGCPETTSFSS 81


>Z68159-2|CAD89732.1|  354|Caenorhabditis elegans Hypothetical
           protein C33D9.3a protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 719 PPVGNPNGTMCPPEMYGCPSEALFFS 642
           P V  P+ T  PP + GCP    F S
Sbjct: 56  PTVSPPSDTSSPPNVIGCPETTSFSS 81


>Z47075-7|CAA87384.1|  394|Caenorhabditis elegans Hypothetical
           protein E02H1.2 protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 417 IRCPLNGICMKTVAPRRAVSASFCGE 340
           IRCPL+ +  K     R +SAS C +
Sbjct: 54  IRCPLSAVSSKMDTTTRNISASICSD 79


>Z36752-8|CAA85330.1|  394|Caenorhabditis elegans Hypothetical
           protein E02H1.2 protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 417 IRCPLNGICMKTVAPRRAVSASFCGE 340
           IRCPL+ +  K     R +SAS C +
Sbjct: 54  IRCPLSAVSSKMDTTTRNISASICSD 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,888,010
Number of Sequences: 27780
Number of extensions: 426115
Number of successful extensions: 1166
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)